Pseudomonas citronellolis: PcP3B5_21530
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Entry
PcP3B5_21530 CDS
T04637
Symbol
fecI_4
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PcP3B5_21530 (fecI_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcq03021
]
PcP3B5_21530 (fecI_4)
Transcription machinery [BR:
pcq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PcP3B5_21530 (fecI_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
DUF6031
HTH_32
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AMO75595
LinkDB
All DBs
Position
2319649..2320158
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AA seq
169 aa
AA seq
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MDREQAFERDVERLYIAHHGWLKGWLQRRLGGHADAEDLAQDTFVRVMRSRSPLADLRQP
LAYLATIANSLLVNRWRRQAVERAYLEALAARPERVAPSEEERLLLIEALVEVDELLHGL
AAQVREIFLMSQLDGLTYPQIAAHLGLSVNQVQKAMGKAFAACYASRFE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgagcaggcattcgaacgggatgttgaacggctctacattgcccaccacggc
tggctgaagggctggctgcagcgtcgcctgggcgggcatgccgatgccgaggacctggct
caggacaccttcgtgcgcgtgatgcgttcgcgcagcccccttgccgacctgcgccagccg
ctggcctacctcgccaccatcgccaatagcctgctggtcaaccgttggcgacgccaggca
gtggagcgtgcctacctggaggcgctggccgcgcgcccggagcgggtggcgccttccgaa
gaagagcgcctgctgctgatcgaagcgctggtggaggtggatgaactgctgcacggcctc
gcggcgcaggtgcgagagatcttcctgatgtcgcagctcgacggcctgacctacccgcag
atcgccgcgcacctgggcctgagcgtcaaccaggtgcaaaaggccatgggcaaggccttc
gctgcctgctacgccagccgcttcgagtga
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integrated database retrieval system
