Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1197
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Entry
PC1_1197 CDS
T00934
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pct03016
]
PC1_1197
Enzymes [BR:
pct01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PC1_1197
Transfer RNA biogenesis [BR:
pct03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PC1_1197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ACT12245
UniProt:
C6DBX8
LinkDB
All DBs
Position
complement(1394910..1396334)
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AA seq
474 aa
AA seq
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MTKKLLIKTWGCQMNEYDSSKMADLLGSTHGYELTEIAEEADVLLLNTCSIREKAQEKVF
HQLGRWKALKDLNPNLIIGVGGCVASQEGAHIRERAHYVDVIFGPQTLHRLPEMINHVQG
TRSPIVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPCDD
VLFEIAQLAAQGVREVNLLGQNVNAYRGETYDGEICSFAELLRLVAAIDGIDRIRFTTSH
PIEFTDDIISVYEDTPELVSFLHLPVQSGSDRVLTMMKRRHTALEYKAIIRKLHNARPGI
LISSDFIVGFPGETQADFEQTMKLIADVNFDMSYSFVYSARPGTPAADMVDDVPEEEKKQ
RLYLLQERITQQAMRFSRLMLGTVQRILVEGTSRKSVMELSGRTENNRVVNFEGTPDMIG
KFVDVEIVDVYTNSLRGIVVRTEDQMDLRVHESPSSVIARTRKENEIGVGFYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaactgcttattaaaacctggggctgtcagatgaatgagtacgattcatca
aagatggctgatttactgggaagtacgcacggctatgagctgactgaaatcgctgaagaa
gccgatgtcctgctgctcaatacctgttcgatccgtgaaaaggcgcaggaaaaggtcttc
catcaacttggccgttggaaagcgctgaaagatctcaatccgaatttgattattggtgtg
ggtggctgcgtcgcctcacaggaaggcgcgcatattcgtgaacgtgcgcactatgttgac
gttatttttggcccacaaaccctgcaccgtctgccggaaatgattaaccacgttcagggc
acacgcagccctatcgttgatatcagtttccctgaaatcgagaaatttgaccgtctgcca
gaaccacgtgccgaaggaccaacggcattcgtctccatcatggaaggttgcaataaatat
tgcacattctgcgtggtgccttatacccgtggggaagaagtcagccgcccgtgtgatgat
gttttgtttgaaatcgctcaactggcagcgcaaggcgtacgtgaagtcaacctactggga
cagaacgttaacgcctatcgcggcgaaacttatgacggtgaaatttgttcttttgccgaa
ctgctgcgtctggtcgccgctattgacgggatcgaccgtatccgttttaccaccagccat
cccattgaattcacagatgacattatcagcgtctatgaagacacgcccgaactggtcagc
ttcctgcatttaccggtgcaaagcggttctgaccgcgtgctgacgatgatgaaacgccgc
cataccgcgctggaatacaaagcgattatccgtaagctgcataacgcgcgtccgggcatc
ctgatcagttctgactttatcgtcggcttccctggcgaaacgcaggctgactttgaacaa
acgatgaagctgattgccgatgtgaatttcgatatgagctacagctttgtctattccgcc
cgtccgggaacaccggctgcggacatggtcgatgacgtgccggaagaagagaaaaagcag
cgtttgtaccttctgcaagagcgcatcacgcagcaggcaatgcgcttcagccgcctcatg
ttgggtaccgtccagcgtattctggtggaaggtacctcgcgtaagagcgtgatggagctg
tctggccgtacggaaaataaccgcgtcgtcaacttcgaaggcacgcctgatatgatcggt
aaattcgtcgatgtagaaatcgttgatgtttataccaattccctgcgtggtatcgtcgtg
cgcaccgaagatcaaatggatctgcgcgtccatgagtcaccgtcttccgtgattgcgcgt
acccgcaaagagaatgaaatcggcgttgggttctaccagccgtaa
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