Phascolarctos cinereus (koala): 110197875
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Entry
110197875 CDS
T05867
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcw01001
]
110197875 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcw04121
]
110197875 (TRIM28)
Enzymes [BR:
pcw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110197875 (TRIM28)
Protein kinases [BR:
pcw01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
110197875 (TRIM28)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110197875 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
PHD
zf-RING_5
zf-RING_UBOX
PHD_2
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110197875
NCBI-ProteinID:
XP_020827587
UniProt:
A0A6P5IZN2
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MAASVAAGAGSPGSGDGPAGAEKRGPGGPGGPAASASAASGGPSGSGSAAAASSSSAAAG
SSAAASAGGPSGPAAAASSASGAAGPAASSASGAAAAAAAGGGPSEAAELLEHCGVCRER
LRPEREPRLLPCLHSVCGQCLLLGPASPAAANNGGDGAGEPAGRGRVVDCPVCKQQCFAK
DIVENYFMRDSGTKTSTDTKDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQRVKYT
KDHTVRSTGPAKTRDGERTVYCSVHKHEPLVLFCESCDTLTCRDCQLNAHKEHQYQFLED
AVRNQRKLLASLVKRLGDKHATLQKNTKEVRTSIRQVTDVQKRVQVDVKMAILQIMKELN
KRGRVLVNDAQKVTEGQQERLERQHWTMTKIQRHQEHILRFASWALESDNNTALLLSKKL
IYFQLHRALKMIVDPVEPQGDMKFQWDLNAWTKSAEAFGKIVSERSGPGSMAPPRAPGKP
GGNQAMDLQEGYGSYGPDDPYSAEPNVSGMKRSRSGEGEVSGLMRKVPRVSLERLDLDLT
ADSQPPVFKVFPGTTNEDYNLIVIERGGQPGAPGGPPMPPMAMVKEEETEAAIGAPPGVE
GLETKPLLLPPLEASGPEGPHLASPSGSTSSGLEVLGGSDAAAAAASAATGGPGAVDDSA
TICRVCQKPGDLVMCSQCEFCFHLECHLPTLQEVPGEEWSCSLCQEVVDCKDEVPLPGPD
SVALTPDGDTCPAKLSPTNQQKCERVLLALLCHEPCRPLHRLATDPTPSAEQPGTLDLTL
IRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMNEAFGD
TKFSAILVEPLPPPIPGPGLAPPELVGGPSDSN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcggtggcggcgggcgcgggcagccccggctccggggacgggcccgcgggc
gccgagaagcgcgggcccgggggccccggggggccggctgcctcggcctcggccgcgtcc
gggggcccttcggggtcgggctccgctgccgccgcctcgtcctcctcggccgcggctggc
tcgtcggcggcagcctcagccggaggcccctcagggcctgcggctgccgcctcctcggcc
tcgggcgccgcgggccctgccgcctcttcggcctcgggcgcggcggcggcggcggcggcg
ggtggagggccgagcgaggcggccgagctgctggagcactgtggcgtgtgcagggagcgc
ctgcggcccgagcgggagccgcgcctgctgccctgcctgcactcggtgtgcggtcagtgc
ctgctgctcgggccggcctcgcctgccgccgccaacaacgggggcgacggcgcgggtgag
cctgccgggcgggggagggtggtggactgtccggtttgcaaacagcaatgctttgccaag
gacatcgtggaaaactatttcatgagagacagtggcaccaagacctccaccgacaccaag
gatgccaaccagtgctgcaccagctgcgaggacaatgcccctgccaccagctactgtgtt
gagtgctcagagcccctgtgtgagacgtgcgtggaggcccaccagcgggtcaagtacacc
aaggaccacaccgtccgctccactggccctgccaagacccgagatggggagcgcactgtc
tactgttcagtccacaagcacgagccgctggtcctcttctgcgagagctgcgacaccctc
acctgccgagattgccagctcaatgcccacaaggagcatcaataccagtttctggaggat
gctgtgagaaaccagaggaagctcctggcctccctggtcaagcgcttgggggacaagcat
gccaccctgcagaagaacaccaaggaagtgcgcacctcgatccgccaagtgaccgatgtg
cagaagcgggtgcaggtggatgtgaaaatggccatcctgcagatcatgaaagaattgaac
aagcgtgggcgcgtgctggttaacgatgcccagaaggtgacagaggggcagcaggagcgc
ctagagcgccagcactggaccatgaccaagatccagaggcaccaggagcacatcctgcgc
tttgcttcctgggctctggaaagtgacaacaacacagccttgctgctgtccaagaagctg
atttacttccagctgcaccgtgccctcaagatgattgtggaccccgtggaaccccagggg
gacatgaagttccagtgggacctcaacgcttggaccaaaagcgccgaggccttcggtaag
attgtttcagagaggagtggtcccggttccatggcccctccccgggcccctggcaagcct
ggaggcaatcaggccatggatctgcaagaaggttatgggagctatggcccagatgatccc
tacagtgctgagcccaacgtgtctggaatgaaaaggtccagatcgggtgagggcgaagtg
agcggcctcatgcggaaggtgcccagggtgagcctggagcgcctcgatctggacctgaca
gcagacagccagcccccagtcttcaaggtcttcccagggaccaccaatgaagactacaac
ctcatcgtcatcgagagggggggccagccaggggcaccagggggtcctcctatgccgccc
atggccatggtcaaggaggaggagacagaggctgccatcggagcccccccaggggtagag
ggcctggagacaaagccactattgctgcctcctctggaggcctcgggccccgagggtccc
cacctggcctcccccagcggcagcaccagctctggcctggaagtgctgggaggctccgat
gcagccgctgccgcggcctctgcagccactggtggccccggagccgtggatgacagcgcc
accatctgccgcgtctgccagaagccgggggacctggtgatgtgtagccagtgtgaattc
tgcttccatttggagtgtcacctgccgaccctgcaggaggtgcctggggaggagtggagc
tgctccctgtgccaggaggtggtggactgcaaagatgaggtccctcttcctggccccgac
agtgtggccttgacccccgatggggatacctgccctgccaagctgtcacctactaaccag
cagaagtgtgagcgtgtgctgctggccttgctctgccacgagccatgccgtcccctgcac
cgactggccacggaccccacaccctcagcagagcagccgggcactctggacctcactctg
atccgcgcacgcctccaggagaagctgtcgcccccatacagctccccacaggagtttgcc
caggatgtgggccgcatgttcaagcagttcaacaaactcactgaggacaaagctgatgtc
cagtccatcattggccttcaacgcttctttgagactcgcatgaacgaggcttttggggac
accaagttctcagctattctggtggagcccctccctccccctatcccgggccctggcctg
gcccctccagagctggtggggggccccagcgacagtaactga
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