Phascolarctos cinereus (koala): 110197949
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Entry
110197949 CDS
T05867
Symbol
ABCA4
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110197949 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcw02000
]
110197949 (ABCA4)
Transporters [BR:
pcw02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110197949 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
AAA_22
AAA_30
SRP54
AAA_15
AAA_29
MukB
Motif
Other DBs
NCBI-GeneID:
110197949
NCBI-ProteinID:
XP_020827680
UniProt:
A0A6P5J018
LinkDB
All DBs
Position
Unknown
AA seq
2001 aa
AA seq
DB search
LAHRPSVQDLLWVTGPLLQNGGPESFSQLMSILSELLCGYPEGGGSRVFSYNWYEDNNYK
AFLGIDPSRKDPVYSYDKRTTPFCNSLIQNLEANPLTKIAWRAAKPLLMGKILFTPDSPA
VRRILKHANSTFEELERVKNFLKAWEEXGPQIWHFFDNSTQITMIRDTLDNPTVKSFVNR
QLDGEEITAEAILNFLYNGPEEGRPKNMVQFGWRNVFNFTDHTLRLVNQYMECLTLDKFE
SYDDEIQLTHRALSLLEQNRFWAGVVFSDIYPWNSVPPRHVKYKIRMDIDAVEKTNKIKD
RYWDPGPRADPVEDFRYIWGGFAYLQDMIEQGIIRSQTKAEVPIGVYLQQMPYPCFVDDV
FMITLNRCFPVFMVLAWIYSVSMMVKSIVLEKEMRLKETLKNRGVSNTVIWCTWFLDSFS
VMAMSTFLLTAFITHGQVLHYSNPVILFLFLLVFSMATIMQCFLFSAFFSKANLAAACSG
ILYFTFYLPHILCFAWQERMTTQMKMMVSLLSPVAFGFGTEYLSRYEEQGLGLQWGNIGK
SPVEGDEFSFLLSIKMMLIDAVLYGFLAWYLDQVLPGDYGTPLPWFFLLQESYWLGGEGC
STREERALEKTEPITEEMEDPDHPEGIYDTFFERELPGLVPGVCVQNLVKVFDYHSKPAV
DRLNITFYENQITAFLGHNGAGKTTTMSILTGLLPATSGTVLIRGKDIETSMDSIRQNLG
MCPQHNILFHHLTVAEHILLYAQLKGKSRKEAELEMETMLEDTGLHHKRNEEAQNLSGGM
QRKLSVAIAFVGDAKVIVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLL
GDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSHGKGCEEACSCTPKGPSI
SCPKVEEITAEQVLDGDINELIEMIRHHVPEAKLVECIGQELIFLLPNKGFKQRAYASLF
RELEETLPDLGLSSFGISDTPLEEIFLRVTGDSESGALFVGDTQQKGPSFSFRNPSSSRN
EKAARGHQASNGSSAPEQIHCAEGQASKEPENTRVQLNKGPQLLCQHVQALLIKRFHHAV
RSRKDFLAQIVLPAGFVCLALLLAVIIPPFGEYPPLTLHPWIYGQQYTFFSSEQPGNEQL
STLAEVLLNRPGFGNRCLKEEAFPNYPCGNSTSWKTPSVSPNMTHLFQKQKWTADNPSPA
CKCSTREKLMMLPECPVGAGGPPPPERVQRSTEILQDLTNRNISDFLVKTYPTLIRSSMK
SKYWVNEQRYGGISIGGKLPVFCITGEEIVGFLRDLGQLMNVSGGPATREAEKEMSNFLK
YLETEDNIKVWFNNKGWHAMVAFLNVANNAILRADLPKDLDPEDFGITLINQPLNLTKEQ
LSEITVLTTSVDAMVAICVIFAMSFVPASFVLYLIQERVSKAKHLQFVSGVSPTTYWVTN
FLWDIVNYAVSAGIVVGIFIGFQKRAYTSPNNLPALIALLFLYGWAIIPMMYPASFLFDV
PSTAYVALSCANLFIGINSTAITFVLELFENNRALLRFSAMLRKALLIFPHFCLGRGLID
LALNQAVTDVYAAFGEEHFSDPFQWDMIGKNLVAMAVEGAVYFTLNLLLQHHFFLTRWIA
EPAKQPITNEDDDVAEERQRILSGGNKTDILRLHELTKIYSGTTSPAVDRLCIGVRPGEC
FGLLGVNGAGKTTTFKMLTGDITVTSGDATVAGKSILTQISEVHQNMGYCPQFDAIDDLL
TGREHLHLYARLRGVPTDDIRRVANWCIQSLGLSPYADHLVGSYSGGNKRKLSTAVALIG
CPPLVLLDEPTTGMDPQSRRLLWNTIVGIIREGRAVVLTSHSMEECEALCTRLAIMVKGT
FQCLGTIQHLKYKFGDGYIVTMKIKPPKVGLLPDLNPAEQFLQANFPDSVQRERHYNMLQ
YRISSSSLARIFQLLISNKDSLYIEEYSVTQTTLDQVFVNFAKQQTEEDDFPLHPRAAGA
IPDAKFDEACASLQMVAYIHN
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
ctagcccatcggccaagtgtccaggacctgctgtgggtaacagggccccttctgcagaat
ggagggccagagtcatttagccaattgatgagtatcctttctgagctcttgtgtggttac
ccagaggggggtggctccagagtgttttcctataactggtatgaagacaacaactacaaa
gccttcctaggcatcgatccttccagaaaagatcctgtctattcttatgataaaagaaca
acacctttttgtaattccttgatccagaacttggaagcaaaccctttaactaaaatagcc
tggagggcagcaaagcccttgctgatggggaaaatcctctttactccagattcccctgct
gttcgacggatattaaaacatgccaactcgacttttgaagaattggagcgtgttaaaaac
tttctcaaggcttgggaagaangtgggcctcagatctggcatttctttgacaacagcaca
cagattaccatgatccgagatactctggataatccaacagtgaaaagctttgtgaacaga
cagcttgatggggaagaaatcacagctgaagccatactcaactttctctataatgggcct
gaggagggccggcctaaaaacatggtccagtttggctggagaaatgtcttcaacttcaca
gaccacaccctgcgtctggttaatcagtacatggagtgcttgaccctggataaatttgaa
agctatgatgatgaaatccagctcacccaccgagccctctcccttctggagcagaatcga
ttttgggctggagtggtgttctctgatatctacccttggaacagtgtgccaccacgtcat
gtgaagtacaagatccgcatggacatagatgcagtggaaaaaaccaataagatcaaagac
agatactgggatcctggtccaagagctgatccagtggaagacttccgttacatttggggc
gggtttgcatatctgcaggacatgattgaacaagggattataaggagtcagaccaaggca
gaagtccccattggagtctatctgcagcaaatgccatacccctgctttgtagatgatgtc
tttatgatcactctgaaccgctgcttcccagtcttcatggtgctggcctggatctactcg
gtttctatgatggtaaagagcatcgtgctggagaaggagatgaggctaaaggagaccttg
aaaaaccggggtgtttccaatactgtcatctggtgcacgtggtttctggacagcttctcc
gtcatggcaatgagcacattccttttgaccgccttcatcacgcatggccaagtcctgcac
tacagcaatccagtcatcctcttcctgttcctcttggtattctccatggccaccatcatg
cagtgcttcctcttcagtgccttcttctccaaggccaacctggcggcagcttgcagcggc
atcctctacttcaccttctacctgcctcatatcctgtgctttgcttggcaggagcgtatg
acaactcagatgaagatgatggtgagcctgctgtcccctgtggcatttgggtttggcact
gaatatttgtctcgatacgaagagcaaggcctcggactccagtggggcaacattggcaag
agccccgtggaaggggatgaattcagtttcttgctctccatcaaaatgatgctgattgat
gcagtcctttatggcttcctggcctggtatcttgaccaagtacttccaggggactacgga
acaccacttccttggtttttccttttgcaagagtcctattggcttggaggtgaaggatgt
tcaacaagagaagaaagggccctggaaaagactgaacccataacagaagaaatggaagac
ccagatcacccagaggggatatacgataccttctttgagagagagctgcctgggctagtc
cccggagtgtgtgtgcagaatctggtaaaggtctttgactaccacagcaagccagcagtg
gaccgcctgaacatcactttctatgagaaccagatcactgccttccttgggcacaatggt
gctgggaaaaccaccaccatgtccatcctgaccggactgctccctgctacttctggcacc
gtgctgattcggggcaaggacattgagaccagcatggactccatccggcaaaatcttggc
atgtgcccccagcacaacatactattccaccatctcacagtggccgaacacatcctgctt
tatgcacagctgaaggggaagtctaggaaggaggcagagctggagatggaaaccatgttg
gaagacacaggccttcaccacaaaaggaacgaagaggcccagaacctgtcagggggcatg
cagaggaagctgtcagttgccattgccttcgtgggagatgccaaagtgatagttttggat
gaacccacctctggggtggatccctattctaggcgctccatctgggatctgctcttgaag
tatcgctcaggccggaccatcatcatgtccactcatcacatggatgaggctgatctccta
ggggaccggatagctatcatttcccagggcaggctgtactgctcagggactcctcttttt
ctgaagaattgcttcggcacgggtttctatctaaccttggtgcgcaagatgaaaaacatc
cagagtcacgggaaaggctgtgaggaggcctgcagctgtacacccaaaggtccgtccatc
agctgcccaaaggttgaagagataacagcggaacaagtattggatggagatataaatgag
ctgattgaaatgatccgccaccacgtgccagaagcaaagctagtagaatgtattggccaa
gagcttatttttctcctcccaaataagggtttcaagcagcgggcctatgccagcctcttt
agagagttagaggaaactctccccgacctgggcctcagcagctttgggatatctgacact
ccactagaagagattttcctgagggtcacaggagattctgaatcaggagcgctgtttgta
ggtgacactcagcagaaaggaccaagttttagcttcagaaaccccagttccagtagaaat
gagaaagcagcaagaggacaccaggcctccaatggctcctcagccccagaacaaatccat
tgtgcagagggccaggcaagcaaggagcctgagaacaccagggtgcagctgaacaaggga
cctcagctgctctgtcagcacgtccaggctttactcattaagaggttccaccatgctgtc
cggagccgcaaagacttccttgctcagattgtgctcccagctggctttgtgtgtttggct
ttgctgcttgctgtcatcatccccccttttggagagtatcctcctttgacgcttcacccc
tggatttatggacagcagtacaccttcttcagctctgaacagccaggcaatgaacaactg
tcaacccttgctgaggttctcctgaatagaccgggatttggaaatcgctgcctgaaagaa
gaggccttcccgaattatccatgtggcaattcaacatcctggaagaccccctctgtttct
cctaacatgactcatctgttccagaagcaaaaatggacagcagacaacccctctcctgcc
tgcaagtgcagcacccgagagaagctcatgatgctcccagaatgccctgtgggggcaggg
gggccccctcctccagagagagtacaacgcagcacggaaatcctgcaggacctcacaaac
cggaacatctcagacttcctggtaaaaacatatcccacgcttataagaagcagcatgaaa
agcaaatattgggtcaatgaacaaaggtatggagggatttccattggaggaaagcttcca
gtcttctgtatcactggggaagagatagttgggtttttacgtgaccttggtcaacttatg
aacgtgagcggaggccctgccacccgagaggctgagaaagaaatgtccaatttccttaaa
tatttggaaactgaagacaacattaaggtgtggttcaacaacaaaggttggcacgcgatg
gttgccttcctcaatgtggctaacaatgcaatcctgagggccgacctgccgaaagacttg
gacccggaggactttggaatcacactcataaaccagccactgaacctcaccaaggagcag
ctctcggagatcaccgtgctgaccacttctgtcgatgccatggtggccatctgcgtgatc
tttgccatgtcctttgtcccagccagctttgttctctatctgatccaggagagagtgagc
aaagcaaagcatctgcagtttgtcagcggtgtgagcccaaccacctactgggtcaccaac
tttctgtgggacattgtcaattatgctgtgagtgctggaatagtggtggggatcttcatt
ggatttcagaagcgagcatacacttccccaaacaatctcccagccctgattgcgctgctc
ttcctttatggatgggccatcatcccgatgatgtaccccgcctccttcctgtttgatgtg
cccagcacggcttacgtggccttgtcttgtgccaacctcttcatcgggatcaacagcact
gccatcacatttgtcctagaattgttcgaaaataacagggcattgctcaggttcagtgcc
atgctgaggaaggcactgctcatttttcctcacttctgtctgggccggggacttattgac
ttagccctgaaccaagccgtgacagatgtctatgccgcctttggtgaggaacatttttca
gatcctttccagtgggacatgattgggaagaacttggttgccatggcagtggaaggggcg
gtctacttcactctgaacctgctcctccagcaccacttcttcctcaccagatggattgct
gagcctgctaagcagcctatcactaatgaagatgatgatgtggctgaagaaagacaaaga
atccttagtggaggcaataaaactgatatcttgaggctacatgagctcaccaagatttat
tcaggcaccacaagcccagcagtggataggctgtgtattggtgttcgccctggagagtgc
tttggtctcctgggagtgaacggtgctggtaagaccaccacattcaagatgctcactgga
gacatcacagtgacctcaggagatgccaccgtggcaggaaagagtattttaacccaaatt
tctgaagtccaccaaaatatgggctattgccctcagtttgatgctatcgacgacctgctc
acaggccgagaacatctgcatctctatgcccgtctccgtggtgttccaacagacgacatc
aggagggtggcaaactggtgcattcagagcctgggtctgtctccctatgcagaccacctg
gtaggcagctacagtgggggtaataagcggaagctgtccacagccgtcgctctgattggc
tgcccacctctggtattgctggatgagcccaccacggggatggacccacagtccaggcga
ttgctatggaacaccatcgtcggcatcatcagggaaggcagagcagttgtcctgacatca
cacagcatggaagaatgtgaagccctgtgtactcggctggccatcatggtgaaaggaacc
ttccagtgccttggcactatacagcacctcaaatacaagtttggggacggctacatcgtc
acgatgaagatcaagccccccaaggtgggcttgcttccagacctgaacccagccgagcag
ttcttacaggcaaacttcccggacagcgtacagagggagagacactataacatgctccag
taccgcatctcttcctcctcgcttgccaggatcttccagctgctcatttccaacaaggac
agcctgtacatcgaggaatactcggtcacacagaccacgctggaccaagtatttgtgaac
tttgctaaacagcagacagaagaggatgattttcccttacacccccgtgcagctggagcc
atcccagatgccaagtttgatgaagcctgcgcatccctgcagatggttgcctacattcat
aattga
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integrated database retrieval system
