Phascolarctos cinereus (koala): 110201201
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Entry
110201201 CDS
T05867
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110201201 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcw00535
]
110201201 (AGRN)
Proteoglycans [BR:
pcw00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110201201 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
EGF
SEA
CFAI_KAZAL
Laminin_G_3
hEGF
DUF4131
Motif
Other DBs
NCBI-GeneID:
110201201
NCBI-ProteinID:
XP_020832364
UniProt:
A0A6P5JMV3
LinkDB
All DBs
Position
Unknown
AA seq
2130 aa
AA seq
DB search
MAGQRQLQRLRRGGLRPPAPPLPPAAPASAPLAPAPARPPQPGRRLLLLLLAALLGLAAG
AGGGTCPERELERREEEANVVLTGTVEEILNVDPVHLTYSCKVRVWRYLKGKEVVTHEIL
LDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVNPAPRYLWPAHKNELMLNSSLMRITLRN
LEEVEHCVGDKPGNHFTQPPPTPPDACRGMLCGFGAVCEQSAGRATCVCKKGPCPTVVAP
VCGSDASTYSNECELQRAQCSQQRRIRVVSRGPCGSRDPCSGVTCSFGSTCTRSADGQSA
KCICPSSCSGVPEGIVCGSDGRDYPSECQLHRLACARQENIVKKFEGPCDPCKGILSDLN
RVCWVNPRTRQPDMLLRPESCPPRQEPVCGDDGVTYANDCVMGRTSATLGLDIQKLRSGQ
CQPQDQCPAPCKFNAVCLIRRGRARCSCDRVTCDGAYRPICAHGGHTYSSDCERQRAECS
QQRALPVKHQGPCDQGPPSPCLGVECPFGATCVVRNWEAVCECQQVCAGLYDPVCGSDGV
TYGSPCELEATACALRKEILVTRKGPCGLCGKCQFGALCEAETGRCVCPTECVTSTQPVC
GSDGNTYGSECELHVHACTRQINLSVASPGHCKTCGETVCTFGAVCSNGQCVCPRCERPP
PSPVCGSDGVTYGSSCELREAACQQQKKIQEARPGPCEDECGSGGSGSGEDGDCEQERCR
RRGGVWDEDAEDDRCVCDFSCQTVLRSPVCGSDGVTYGNECELKKARCESRQELYVTAQG
ACRATSTMAPPPPVLHCSQTPYGCCLDNVTRAQGVGLAGCPSTCQCNAYGSYGGSCDPTS
GQCSCRPGLGGLKCDRCEPGFWNFRGIVTDGRSGCTPCNCDPGGSVRDDCEQMTGLCSCK
EGITGMKCSQCPPGSILGSSGCEKDPLAPKSCAELSCVFGSSCVEAGGSAHCECPAPVCP
EDSMIKVCGSDGVTYGDPCQLRTIACRQGQTITVRHFGQCHEPITHGSPPAHPPTAPSEE
ASETILPSLLRFTSQAPETPVTTEPGTMWQGQGAQPTPRSHPATRPSVPAWTTAGVRRTT
TRPAPAQTTPSIHRTTVRPSTPTWTTAGVHRSTVRPILTAPVAPAAIPTLAYSESGSTDD
SSGDEELSGDMEASGVGSAGIELLEEGGVAAPTPPVERASCYNLPLGCCSDGETPALDAE
GTNCPATKVFQGVLVLEEVEGQELFYTPEMADPKSELFGETARSIESVLEGLFRNSDVKK
DFRSVRMRDLGPGGSVRAIVDAHFDPSTSFTALDVGRALLKQIRASKKRVLVVKQPLGDH
VKFMDFDWLPVLFTTATTTTTVATAEAMTPGSHHTSAVTPHTLYPGHLGRPHGRTLAPPV
TRRPSTTIALPPATPPVTRRPPRPCDSHPCLHGGTCEDNGKDFTCSCPAGRGGAVCEKAV
QYFVPAFGGRSYLAFPTLRAYHTLRVAMEFRVSEPHGLLLYNGQSSGKDFIALTLVNGFV
ELRFDTGSGVGIVTSKVPVDRGRWHRLVVTRNRRHGVLSVDGEPHVSGESPGGTDGLNLD
TDLFVGGVPEDQASVVSERTSARAGLRGCIRLLDVNNQRIGLREKGPDVLYGSGVGECGG
NPCLPNPCHHGATCQAREADTFHCQCPKGREGPTCADERNPCQPNPCQGAATCRVLPEGG
AKCECPMGRGGRFCQTVTEQDPSRPFLPTFNGFSYLELKGLHTFGDVRGEKMAMEVVFLA
RSPTGVLFYNGQKTDGKGDFVSLALHGGHLEYRYDLGKGAAVIRSKEPITLNKWTRVSLE
RNGRKGAMWINDGERVLGESPKSRKMPHTVLNLKEPLYVGGAPDFSKLARAAAVSGGFDG
AIQTVSLKGRQLLTRDNVLDAVEISSFPDHPCTQASGQPCLNGGSCSPQQDTYECLCPGG
FSGAHCEKGLIEKSAADLDSIAFDGRTFIEYHNAVTTSPDGLDSGVLSSEKALQENHFEL
SLRTEAMQGLVLWSGKGTERADYIALAIVNGRLQMTYDLGSQPVVLHSTVPVNTNRWLRV
KASRVQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLTVAHSLPKAYSTGFVG
CLRGVVVGQKELHLVEDALHKPALRHCSAP
NT seq
6393 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcagaggcaactgcagcggctgcggcggggcggcctgcgcccccctgccccg
cccctgcccccggccgcgccggcctcagctccgctggccccggccccggcccgaccgccg
cagcccgggcgccgtctgctactgttgctgctcgccgccctgctcgggctggccgccggc
gccgggggcgggacatgtcccgagcgggagctggagcggcgcgaggaggaggccaacgtg
gtcctcacgggcaccgtggaggagatcctgaacgtggaccctgtgcacctcacctactcg
tgcaaggttcgggtctggcgatatcttaagggcaaagaagtggttacccatgagatcctg
cttgatggtgggaacaaagtggtgattggcggctttggagatccactcatttgtgacaac
caggtgtccactggggacacccggatcttcttcgtgaaccccgccccacgctacctgtgg
ccagcgcataagaacgagctgatgttgaactccagcctcatgcgaatcacgctgcggaac
ctggaggaggtggagcactgtgtgggagacaaacctgggaatcatttcacgcagccgccc
ccgacacctccagatgcgtgccggggtatgctatgtggctttggggctgtgtgtgagcag
agtgctggccgggccacatgcgtgtgcaagaagggcccatgccctactgtggtggcccct
gtgtgtggatctgatgcctccacctacagcaatgagtgtgagctacagagggctcagtgc
agccagcagcgacgcatccgcgtggtcagccgggggccctgtggctcccgggacccctgc
tcgggggtgacctgcagtttcggcagcacctgtacccgctcggcagatgggcagtcggcc
aaatgcatctgcccgtcctcatgcagcggtgtccccgagggcatcgtctgtggtagcgat
gggcgtgactaccccagtgagtgccagctgcaccgccttgcctgtgcccgtcaggagaat
attgtcaagaagtttgaagggccctgtgatccatgcaagggcattcttagtgacctgaat
cgtgtgtgctgggtgaacccccgcacccgccagcctgacatgctactacgacccgagagc
tgcccaccccgccaggagccagtgtgtggtgatgacggcgtcacctacgccaacgattgt
gtcatgggccgtaccagcgccaccctgggcctcgacatccagaagctgcgctctgggcag
tgccagccacaagaccagtgcccggccccctgcaagtttaatgctgtgtgtctgatccgc
cgtggccgtgcccgctgctcctgtgaccgagtcacttgcgacggtgcctaccggcctatc
tgtgcgcacgggggccacacgtacagcagcgactgtgagcgccagcgtgccgagtgtagc
caacagcgggctctccctgtcaagcaccaggggccctgtgaccaaggtccccccagcccc
tgcctgggtgtcgagtgtccttttggggccacgtgtgtggtgaggaattgggaggctgtg
tgtgaatgtcagcaggtatgtgctggcctctacgaccccgtatgtggcagtgacggtgtc
acctacggaagcccctgtgagctggaggccacagcctgcgccctcaggaaggagatcctg
gtcacccgcaaggggccctgtggcctgtgtgggaagtgccagtttggggccctgtgcgag
gcggagacaggccgctgtgtgtgccccacggagtgtgtgacttccacccagcctgtgtgc
ggctccgatgggaacacatacggcagcgagtgtgaactccacgtgcacgcgtgcactcgc
cagatcaacctcagcgtggcctcccctggacattgcaagacatgtggggagacagtatgt
acctttggggccgtgtgctccaatgggcagtgcgtgtgcccccggtgtgagcggccgccc
ccgagcccggtctgtggtagtgatggagtcacctacggcagcagctgtgagcttcgagag
gctgcctgccagcagcagaagaagatccaggaggcccggcccgggccctgcgaggacgaa
tgtggttctgggggctcgggctcgggtgaggatggtgactgtgagcaggagcggtgccgg
cgacggggaggcgtgtgggatgaggacgctgaggacgatcgatgtgtctgtgacttcagc
tgccagacagtgttacgcagcccggtgtgtggttctgatggggtcacctatgggaacgag
tgtgagctgaagaaggcgaggtgtgagagtcgccaggagctgtatgtcacagcccagggg
gcctgccgagccacgtctacgatggccccgcccccacctgtcttgcactgctctcagacc
ccctatggctgctgtctggacaatgttaccagggcccagggcgttggcttggccggctgt
ccaagcacctgtcagtgtaatgcgtacgggtcctatgggggaagctgtgaccccacctca
ggacaatgctcctgccgcccagggttggggggcctcaagtgtgatcggtgcgagccaggt
ttctggaacttccgtggcatcgtgactgacggccggagtggctgcaccccctgtaactgt
gaccctggaggctcggtaagagatgactgtgaacagatgaccggcctgtgctcctgcaag
gagggcattacgggaatgaaatgcagccagtgcccccccggcagcatccttggctcctcg
ggctgtgagaaagaccccttggctcccaagtcatgtgccgagctgagctgtgtgtttggg
tcatcctgtgtggaggctggcggctctgctcactgtgagtgcccggcacctgtatgtcca
gaggacagtatgatcaaggtctgtggctcagatggagtgacctatggagacccgtgccag
ctgaggaccatcgcctgtcgccagggccagacaatcactgtgcggcattttgggcagtgc
catgagcccatcacccatgggagcccccctgcccatcctcccacagccccatctgaggag
gcctcagaaactatcctgccctccctcctgaggttcaccagtcaggccccagagacccca
gtgaccacagaaccagggactatgtggcagggacagggtgcccagcccacgccccgcagc
catcccgccactcggccttctgtgccagcctggaccacagcaggtgtccgccggaccaca
acacggcctgctcccgcacagaccaccccaagcatccacaggacaacagtacggccttcc
actcctacctggaccacggcaggcgtccacaggagcacagtgcggcccatcctgactgcc
ccagtagcccccgctgccatccccaccttggcctactctgagtcgggcagtaccgacgac
agcagcggtgacgaggagctcagcggtgacatggaggccagcggggtgggatctgcaggg
atagagcttctggaagaggggggtgtggcggcccccactcctcctgtcgagagggcttct
tgttacaacttgcccctgggctgctgctcggatggagagacacccgccctggacgccgag
ggcaccaactgcccagcaaccaaggtgttccaaggagtgctagttttggaagaggtcgag
gggcaggagttattctatactccagagatggcagaccccaagtcagagctcttcggggag
acggcccgaagcattgagagcgtgctggagggcctgttccggaattcagacgtcaagaag
gacttccggagcgtccggatgagggacctgggcccaggtggctctgtgcgcgccattgtg
gatgcccactttgacccctccacatccttcacggctcttgatgtgggccgggccttgctg
aagcagatcagagcatctaagaagagggtcctggtagtgaaacagccccttggagaccac
gtcaagttcatggactttgactggctccctgtgctgttcaccacggctaccacgaccacc
actgtggccacggctgaggccatgaccccgggcagccatcacacctctgccgtgactccc
cacacactgtacccaggtcacctgggccggccccatggcaggactctggccccaccagtg
acccgtagaccatccaccactatagcccttcccccagccactccccctgtgactcggaga
cctccccggccctgtgactcccacccctgcctccatggaggcacctgtgaggataatggg
aaggacttcacctgcagctgcccagctggccggggtggtgccgtctgtgagaaagccgtg
caatatttcgtgcccgcctttgggggcagatcctacctggccttccccacactccgagcc
taccacaccctgcgtgtagccatggagttccgggtgtccgagccccacgggcttctcctg
tacaacggtcagagctccgggaaggacttcattgcactcacgctggtcaacggctttgtg
gaactcaggtttgacacaggctccggcgtgggcatcgtcactagcaaggtgcccgtggac
cgtggccggtggcaccggctggtggtgacgaggaaccggcgccacggggtgctctctgtg
gacggggagccccatgtgtccggtgagagtcccggcggcaccgatggtctcaacctggac
acagacctgtttgtgggcggcgtccccgaggaccaggcgtccgtagtgtcagagcgcaca
tcagccagggccggtctgaggggctgcatccgcctcttggatgtgaacaaccagaggatc
gggctgcgggagaagggcccggatgttctctacggctcgggggtgggcgagtgcgggggc
aacccctgcctgcccaacccctgccaccatggtgccacctgccaggcccgagaggctgac
acgttccactgccagtgtccaaagggccgagaaggccccacctgtgctgatgagaggaat
ccctgccagcccaatccttgccaaggggcagctacctgccgagtgctgcccgagggaggc
gccaagtgtgaatgccccatggggcgagggggccggttctgtcagacagtcacagagcaa
gatccatccagacccttccttcccaccttcaacggtttttcctacctggagctgaaaggc
ctgcacaccttcggggatgttcggggggagaagatggccatggaagtggtattcctggcc
cggagtcctactggcgtcctcttctacaacgggcagaagactgatggcaaaggtgacttc
gtgtccctggccctgcatggcgggcatctggagtatcgctatgatctgggcaagggagcc
gcagtcatcaggagcaaggagcccatcaccctgaacaaatggacccgggtctctctggag
cggaacgggaggaaaggggccatgtggatcaatgatggggaacgagtgctaggagagtcc
ccaaaatcccgaaagatgccacacactgtcctcaacttgaaggaaccactatatgttgga
ggtgctcctgatttcagcaaactggcccgtgcagctgctgtctctggaggctttgatggg
gccatccagacggtctcactgaagggccgtcagctgttgacaagagacaatgtcctggat
gctgttgagatctcctccttccccgaccacccctgtacccaggcctcgggccagccctgc
ctcaatgggggctcctgctctccccagcaggacacctatgagtgcctgtgcccggggggc
ttctcgggggcccactgcgagaaggggctgattgagaagtcggctgctgacctggactcc
atcgcctttgatggacgcacattcattgagtatcacaatgcagtgacaaccagtcctgat
ggtctggactccggggtcctttccagtgagaaggccttgcaagagaaccactttgagctg
agcctgcggacggaggccatgcagggactggtgctgtggagcggcaagggcacagagcgg
gctgattacatcgcgctggccattgtgaatggccgcctgcagatgacctatgacctgggc
tcccagcccgtcgtgctgcactccacggtgcctgttaacaccaaccgctggctgcgcgtc
aaggcctctagagtacaaagggaaggctcccttcaggtcggcaatgaggccccagtgaca
ggatcttcccctctgggggccacgcagttggacacagatggagctctctggctggggggc
ctggagaagttgactgtggcacacagcctacccaaggcatacagcacgggctttgtgggc
tgcttgcggggagtggtggtgggccagaaggagctgcacctggttgaggacgccttacat
aagcctgccctgcggcattgctcggccccttga
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