Paenibacillus crassostreae: LPB68_09685
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Entry
LPB68_09685 CDS
T05196
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LPB68_09685
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcx01007
]
LPB68_09685
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcx03016
]
LPB68_09685
Enzymes [BR:
pcx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LPB68_09685
Amino acid related enzymes [BR:
pcx01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LPB68_09685
Transfer RNA biogenesis [BR:
pcx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LPB68_09685
Prokaryotic type
LPB68_09685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Nucleocap_ssRNA
Fes1
HEPN_Cthe2314
Motif
Other DBs
NCBI-ProteinID:
AOZ92480
UniProt:
A0A167BTL4
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All DBs
Position
2063426..2064703
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AA seq
425 aa
AA seq
DB search
MLDIRFIRDNPDLVQRIAEQKRMELSVSDLLKWDQKRRDLLKQTEDLRAKRNQLTHTIAT
SLQQGHNQDAEPLKAQVKDINKRLSVTEVELTHATQQCDNLMMLIPNIVSPDTPVGNDDH
DNVEVRQVGTPPVFDFVALDHVRLGEIHDLIDIPRGVKTAGSRNYYLKGNGLYLHLAVQR
LALDLLTSYGFTAMDVPVMVRPEALTRTGFFPTGQDQTFEVIGEDKWLVGTSEVSLVSYY
SDEIVNVTEPIRLAGVSACYRKEIGSAGRDVRGLYRVHQFAKVEQVVLCENNNEVSDRIL
QEITSHAEEILQLLELPYRVMAVCTGDMSQKTYKQYDIETWMPSRQAYGETHSSSNVLDF
QARRSNIRYRDHDGKLQYCHTLNNTAVATPRILIPLLENHQQSDGSIYIPKALRPYMKGM
DSLSF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatccgatttatccgggacaatccggacttggtacaaagaatcgctgaacag
aaaagaatggaactctcagtcagtgatttattgaaatgggatcagaaaagacgggatctt
ttgaaacaaacagaagatttgagagctaagcgtaaccagttgacacacaccatcgcaaca
tctctgcaacaaggacataatcaggatgctgaacctcttaaagcacaagtaaaagacatc
aacaaacggttatcagtgactgaggttgaattaactcacgccacacaacaatgcgacaac
ctcatgatgttgatccctaatatcgtatcacccgatacgcctgtaggtaacgatgatcat
gacaatgtagaggttcgacaggtcggaactcctcctgtgttcgatttcgtagcattagat
catgtacggctaggagaaatccatgatctcattgatatcccccgtggcgtgaagactgca
ggtagccggaactattacctcaagggcaacggcctgtacttacatttagccgtacaacgc
ttagctctcgatctacttacttcgtatggattcacggctatggacgttcccgtgatggtt
cgaccggaagcactcacaagaacagggttcttcccaacagggcaagatcagactttcgaa
gtcatcggggaagataagtggctagttggaacatctgaggtctcgttggtctcgtattac
agcgatgagattgtcaatgtgactgaacctatcagacttgctggcgtgtcagcatgctac
cgtaaagaaattggatcagccggccgagatgttcgcggcctatatcgagtgcatcaattt
gcgaaagtagaacaagtcgttctttgcgagaataacaacgaggtgtcagatcgaatatta
caggagattacaagtcatgcggaggaaattctccaattactcgaacttccttatcgagtc
atggcagtctgtacaggagacatgtcgcaaaagacgtataagcaatatgatatcgagaca
tggatgcccagccgtcaggcgtatggagagacgcattcctcttcaaatgtcctggacttc
caagcgcgtcgttcaaacattagatacagggatcatgacgggaagctacaatactgccat
acactaaacaacacagctgtggcaacaccacgcattctgattccacttctagagaatcat
caacaatccgatggttccatctatatacctaaggcattgcgtccttatatgaagggaatg
gatagccttagtttctga
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