Plasmodium cynomolgi: PCYB_103290
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Entry
PCYB_103290 CDS
T02490
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcy
Plasmodium cynomolgi
Pathway
pcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PCYB_103290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcy03041
]
PCYB_103290
Enzymes [BR:
pcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PCYB_103290
Spliceosome [BR:
pcy03041
]
Complex A
U2 snRNP components
U2 related factors
PCYB_103290
Complex B
PCYB_103290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
14693339
NCBI-ProteinID:
XP_004222926
UniProt:
K6UUC6
LinkDB
All DBs
Position
10:complement(1041680..1046292)
Genome browser
AA seq
1410 aa
AA seq
DB search
MSDYYERYRKDRNSSISSSSKRKRSDSRYDNYGRKKEYHEEGIYKRARPLEDDEEEEEAS
FGRDMQCYRERRREQWGDRIRRDRERDRERDREREKYYQRGYERGYERERERERERERDR
RRDRSPEERPKKTKRKEYLSHSSDGEEEEEEEHTDGRNGRGRHRVSGGRHPEDAAARRVQ
RERDRYEAKESRGERRRTRKRSSSDDRSDEGRGDETATKRDREDENKLSRLERLKQFAER
IKKTGSDEVSPKAGAKATKFTLNTTISSAGRKFHLDVFEGGRQDEDDVEEQQQQERKKKE
KWKWQMKKEEELKSGELKSGELRAGKTKKDSATRGGPGRGGLLSNSPNRRDGGEEPAEES
PAGDDNEDPLEVFMRNLERNCAGAEGEAVGPSKAITLEEIYSYDENRHRFEGAKPPGGEP
PGAAVHSGEVAEEMHKTAKQPSQSAKQPSQSAKQPSQSAKQPSQSAKQPSQTANQPTQSA
KQPSQTANQPTQSADLQDDQSGEEYHRLFIQALRKKAEEAGEGRGASPPRRTGSNAGSNA
GSNAVRSDGSSEPIDNLSEDSEYNIETNALKKTNKKMLQVNRDQVEYLPIKKNIYVQVSE
ITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILERKNFKKMFGIQMQ
TIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQPPLRNNDGPIAIILTPTRELSKQV
KSEARPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLN
RVSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPTYIQNLAKRLLYKPIEI
IVGEKGKTNNNIYQFVEVVQVKQKVYKLLKILGDWSTYGLILIFVNKQLEADLLYLELFK
YDYKTLVLHGGQDQADREFTLQTFKEGKNKVLIATSVMARGIDIKDIIVVINYECPDHIE
DYIHRVGRTGRSNKIGYAYTFITPEEHAKAYDIYSLIKNNIYYMNKTIDIPRELEELVRE
YTQSSNFAEVRKKGYKGKGFKFTPNEKSRLQMDKANAKKELGLVRDKEGETDNPPGGDAS
DGEVGEGAAGRAAGRAAGRAAEGSVLGGSAPPLGIPQPQQRQPQQRQPQQRQAQQRQAQQ
RQSQQGQPQQRQPQQRQPQQWQPQPPPPPGEPNPQSEIKRIELEIQRIKMNDTMDLSLKA
KQINELMKTYNIMAQQQNAMKKNAEAAQEADIEKMAEQEATKATEHIKDETERKQLFNKV
KQDVKKKLIDSKLQSNSRTENIHRNMLLNSMRIRNMKKYSPFIPHTYVMEDNSIMQEFYI
NDYPQHVRLKICNREVLSRISDMSGSRCQIKGQYSNPNQPNKTTFLLDAKPLHIEITASN
YNQVQIAHNEFTSLINQLLQNSNMKGHRKG
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactactacgagcgttacagaaaggacaggaacagcagcatctccagtagcagc
aagcggaagagaagcgacagtcggtatgataactatggaaggaagaaggagtaccacgag
gaggggatctacaaaagggccaggcctctggaggacgacgaggaggaggaggaagcgagc
tttggcagggatatgcaatgctatagggagcgccggagggagcagtggggcgaccggata
aggcgcgaccgagagcgcgaccgagaacgcgaccgagagcgcgaaaaatattatcaacga
ggttacgaacgaggttacgaacgagagcgcgagcgggagagggagagggagcgcgaccgc
cgcagagacaggtcccccgaggagcgcccaaaaaaaaccaaaaggaaagaatacctctcc
cacagcagcgacggagaggaagaagaagaggaagaacacacggatggcaggaatggcagg
ggtagacaccgagtgagcggcgggaggcacccagaagacgctgctgcaaggagggtgcag
cgcgagagggatagatacgaagcgaaggagagtcgaggggaaaggaggaggacaaggaaa
cgcagcagcagtgatgatagaagcgacgagggaaggggggacgagacggcaaccaagcga
gatcgcgaagacgaaaataagctctccaggttggagagacttaagcagttcgcggagaga
atcaagaaaacgggtagcgacgaggtcagccctaaggctggagcgaaagctaccaagttt
acgcttaacacgacgatcagcagcgccggcaggaagttccatctagacgtgtttgaggga
ggtaggcaagacgaggacgatgtggaggagcagcagcagcaggagaggaagaagaaggaa
aagtggaagtggcagatgaagaaggaggaggagttgaagtcgggggagttgaagtcgggg
gagttgagggcgggaaagacgaagaaggatagcgccacacgtggaggcccggggagaggg
ggtctgctttccaactcgcccaacaggagagacggcggagaagagcccgcggaggaatcg
cctgcgggggacgataatgaggaccccctcgaagtgttcatgcgaaacttggagcgcaac
tgcgcgggggcagagggcgaggcggtgggccccagcaaggccataacgctggaggagata
tacagctatgacgagaaccggcaccggttcgagggggcaaagccgcccgggggagagccc
cccggagcggccgtccactcgggggaagtcgctgaagagatgcacaaaaccgcgaagcag
ccgtcccaatccgcgaagcagccgtcccaatccgcgaagcagccgtcccaatccgcgaag
cagccgtcccaatccgcgaagcagccgtcccaaactgctaaccagccgacccaatccgcg
aagcagccgtcccaaactgctaaccagccgacccaaagcgccgatctgcaagacgaccag
agcggcgaggaataccaccgattgttcatacaagcgctgaggaagaaagccgaggaggca
ggcgagggcagaggggcgtcgcccccccgtcgcacggggagtaacgcagggagtaacgca
ggaagtaatgcagtacgaagcgatgggagcagcgagccaatcgataacctgagtgaagac
agcgaatacaacatcgaaacgaatgcgctgaagaaaacgaacaaaaagatgctccaagta
aaccgggaccaagtggagtacctaccgataaaaaaaaacatttacgtgcaagtaagcgaa
ataacaaatatgaaagaaagcgacgtggacctctttaggaagaataatggaaatataatc
gtgaggggaaagaactgccctcgaccagtacagtacttttatcaatgtggactgccatct
aaaatcctacctattttggagagaaaaaattttaaaaaaatgtttggcatacagatgcag
acgatcccagcgttgatgtgtgggagggacgtgatcgccattgctgagacggggagtgga
aaaactttatcgtatttatttccagtcattagacacgtccttcaccaaccaccccttcga
aataatgatggcccaatcgctatcatacttactcctaccagggagctcagcaagcaggtt
aaaagtgaagctagaccctactgtcaagcggtgaacctccgaatattggcagtctatggg
gggtcaaatattggtacacaactaaatacactgaaaagaggagtggaaattctggtgggt
actccaggtcgtataattgatatactaacaataagtaactgtaaggtgaccaatctgaat
agagtctccttcgtcgttttggatgaagccgatcggttgttagacctcggattcgagtct
caaatacataacatacttaacaactgcagaaaggacaaacaaacagccatgatttcagca
accttccctacgtatattcaaaatctagccaagagattgctttacaagccaatcgaaatt
attgtaggagaaaaaggaaaaacgaacaataacatatatcaatttgttgaggttgtacaa
gtcaaacagaaggtctacaaacttctgaagattcttggagactggtcaacctatggctta
attctcatttttgtaaacaagcagttagaagcagatctactatatttagaactctttaag
tatgattacaaaacgttagttctgcatggaggacaggatcaagctgatagggaattcact
ctacaaacattcaaagaagggaagaataaggtactcattgctacgtcggttatggcaaga
ggtatcgatataaaggatatcatagtggtaattaattatgagtgtcctgatcatatagag
gattacattcatcgtgttggaagaacaggtaggtcgaacaaaattggatatgcttatacg
tttattactcctgaggaacatgctaaggcgtatgatatatacagcctcatcaaaaacaac
atatattacatgaataaaacgattgatattccgagagagttggaagaacttgttcgggag
tatactcaaagtagcaactttgctgaggttagaaagaaagggtacaagggtaaggggttt
aagtttactccgaatgagaagtcccgacttcagatggataaggccaatgcaaagaaggaa
ctcgggttggtgcgcgataaggagggagagacggacaaccctccggggggagacgcctcc
gatggggaagtgggcgagggggcggcaggcagagcggcaggcagagcggcaggcagagcg
gcagaaggttcggtgctggggggaagtgctcctccacttggaattccccagccgcagcag
aggcagccgcagcagaggcagccgcagcagaggcaggcgcagcagaggcaggcgcagcag
aggcaatcgcagcaggggcagccacaacagaggcagccacaacagaggcagccacaacaa
tggcaaccacaaccaccgcccccgcccggggaacccaacccacaaagcgaaataaaacgc
atcgaactggaaatacagagaataaaaatgaacgacactatggacctgtcgctaaaggcg
aagcagataaacgagctgatgaagacgtacaacatcatggcgcagcaacagaacgccatg
aaaaaaaatgcagaagctgcacaggaagctgacatagagaaaatggccgaacaggaggcc
accaaggcaaccgaacatataaaggatgaaacggaaaggaagcaactctttaacaaagtt
aagcaagacgtgaagaaaaaactaatcgatagcaaactgcagagcaactccaggacggaa
aatattcataggaatatgctcctaaactcgatgaggatacgaaacatgaagaaatactct
cccttcattcctcacacctatgttatggaagacaactccatcatgcaggagttttacatt
aatgactatccgcagcatgtgcgactgaagatatgcaacagggaggtactctctcgcatt
tccgatatgtctggttcaaggtgccagataaagggtcagtactccaaccccaatcagcca
aacaagaccaccttcctgctcgacgccaagccgctacacattgaaatcaccgcgtccaac
tacaaccaggtgcagattgcgcacaacgagttcacgtcgctgatcaatcagttactgcag
aatagcaatatgaaggggcaccgcaaggggtga
DBGET
integrated database retrieval system