KEGG   Phoenix dactylifera (date palm): 103701336
Entry
103701336         CDS       T03274                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03030  DNA replication
pda03410  Base excision repair
pda03420  Nucleotide excision repair
pda03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103701336
   03410 Base excision repair
    103701336
   03420 Nucleotide excision repair
    103701336
   03430 Mismatch repair
    103701336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pda03032]
    103701336
   03036 Chromosome and associated proteins [BR:pda03036]
    103701336
   03400 DNA repair and recombination proteins [BR:pda03400]
    103701336
DNA replication proteins [BR:pda03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103701336
  DNA Replication Termination Factors
   ELG1-RFC complex
    103701336
Chromosome and associated proteins [BR:pda03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103701336
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103701336
  Check point factors
   HRAD17(Rad24)-RFC complex
    103701336
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 Rad17 RuvB_N AAA_11 AAA_16 Mg_chelatase AAA_5 AAA_assoc_2 AAA_14 AAA_24 DUF3802 nSTAND3 SLFN-g3_helicase ResIII AAA_2 DNA_pol3_delta AAA_19 PhoH AAA_7 AAA_28 AAA_30 DUF3853 AAA_18 bpMoxR DNA_pol3_gamma3 Parvo_NS1 RNA_helicase AAA_25 DUF815 TIP49 IstB_IS21 ATPase_2 NB-ARC AAA_17
Other DBs
NCBI-GeneID: 103701336
NCBI-ProteinID: XP_008781582
UniProt: A0A8B7BMI6
LinkDB
Position
14:7404717..7410660
AA seq 341 aa
MAPVAPSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLYGPEMYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGSRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
NRILHICKAEGLTLDSEALSTLSSISQGDLRRAITYLQSAARLFGSTISTKDLISVSGVI
PQDVVQSLFMACKSGDFDVADKEVSNIIAEGYPVSQMLSQLLEVIVNADKISDEQKARIC
KKLGESDKCLIDGADEYLQLMDVACHAMRALCNMPEELHFS
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcgcccgtagcaccaagctcgcagccatgggtggagaaataccggccgaagcaagtg
aaggacgtggctcaccaggacgaggtcgtgcgtgtcctcaccaataccctcgagacctcc
aattgccctcacatgctcttctacggccctcccggaacggggaagaccaccaccgcgctc
gccatcgcccaccaactctacggaccagaaatgtacaagtcaagagttctagaactcaat
gcaagtgatgatcgtggaattaatgttgtgcggacaaaaatcaaagattttgctgctgtt
gctgtgggttctggatctcgtcaaggtggttatccatgcccaccttacaagatcattatc
ctagacgaggctgattcaatgactgaagacgcacagaatgctttgaggcgtactatggaa
acttattccaaagttacaagattcttctttatatgtaactatatcagcaggattatagag
ccgcttgcttccagatgtgcaaagtttaggtttaagcctctttctgaagagatcatgagt
aatcgcattttgcacatttgtaaagcggaaggccttaccctggattctgaggctctttct
actctgagctccatctcccaaggtgatctgcgccgtgcaattacatatttgcagagtgca
gctcgcttatttggatcaaccatttctaccaaagacctaattagcgtttctggggtaatc
cctcaggatgttgttcagtcactgtttatggcttgcaaatctggtgactttgatgtggca
gacaaagaagttagtaatataattgcagagggatatccagtttcacagatgctttcccag
ttgttagaggtaatcgttaatgcagacaagatatcagatgaacaaaaggcaagaatttgc
aagaaactgggtgaatctgataagtgcctgattgatggagcagacgagtatttgcaacta
atggatgtggcctgtcacgcaatgcgagctctttgcaacatgccagaggaattgcacttt
agttaa

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