Phoenix dactylifera (date palm): 103701336
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Entry
103701336 CDS
T03274
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03030
DNA replication
pda03410
Base excision repair
pda03420
Nucleotide excision repair
pda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103701336
03410 Base excision repair
103701336
03420 Nucleotide excision repair
103701336
03430 Mismatch repair
103701336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
103701336
03036 Chromosome and associated proteins [BR:
pda03036
]
103701336
03400 DNA repair and recombination proteins [BR:
pda03400
]
103701336
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103701336
DNA Replication Termination Factors
ELG1-RFC complex
103701336
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103701336
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103701336
Check point factors
HRAD17(Rad24)-RFC complex
103701336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
RuvB_N
AAA_11
AAA_16
Mg_chelatase
AAA_5
AAA_assoc_2
AAA_14
AAA_24
DUF3802
nSTAND3
SLFN-g3_helicase
ResIII
AAA_2
DNA_pol3_delta
AAA_19
PhoH
AAA_7
AAA_28
AAA_30
DUF3853
AAA_18
bpMoxR
DNA_pol3_gamma3
Parvo_NS1
RNA_helicase
AAA_25
DUF815
TIP49
IstB_IS21
ATPase_2
NB-ARC
AAA_17
Motif
Other DBs
NCBI-GeneID:
103701336
NCBI-ProteinID:
XP_008781582
UniProt:
A0A8B7BMI6
LinkDB
All DBs
Position
14:7404717..7410660
Genome browser
AA seq
341 aa
AA seq
DB search
MAPVAPSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLYGPEMYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGSRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
NRILHICKAEGLTLDSEALSTLSSISQGDLRRAITYLQSAARLFGSTISTKDLISVSGVI
PQDVVQSLFMACKSGDFDVADKEVSNIIAEGYPVSQMLSQLLEVIVNADKISDEQKARIC
KKLGESDKCLIDGADEYLQLMDVACHAMRALCNMPEELHFS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgtagcaccaagctcgcagccatgggtggagaaataccggccgaagcaagtg
aaggacgtggctcaccaggacgaggtcgtgcgtgtcctcaccaataccctcgagacctcc
aattgccctcacatgctcttctacggccctcccggaacggggaagaccaccaccgcgctc
gccatcgcccaccaactctacggaccagaaatgtacaagtcaagagttctagaactcaat
gcaagtgatgatcgtggaattaatgttgtgcggacaaaaatcaaagattttgctgctgtt
gctgtgggttctggatctcgtcaaggtggttatccatgcccaccttacaagatcattatc
ctagacgaggctgattcaatgactgaagacgcacagaatgctttgaggcgtactatggaa
acttattccaaagttacaagattcttctttatatgtaactatatcagcaggattatagag
ccgcttgcttccagatgtgcaaagtttaggtttaagcctctttctgaagagatcatgagt
aatcgcattttgcacatttgtaaagcggaaggccttaccctggattctgaggctctttct
actctgagctccatctcccaaggtgatctgcgccgtgcaattacatatttgcagagtgca
gctcgcttatttggatcaaccatttctaccaaagacctaattagcgtttctggggtaatc
cctcaggatgttgttcagtcactgtttatggcttgcaaatctggtgactttgatgtggca
gacaaagaagttagtaatataattgcagagggatatccagtttcacagatgctttcccag
ttgttagaggtaatcgttaatgcagacaagatatcagatgaacaaaaggcaagaatttgc
aagaaactgggtgaatctgataagtgcctgattgatggagcagacgagtatttgcaacta
atggatgtggcctgtcacgcaatgcgagctctttgcaacatgccagaggaattgcacttt
agttaa
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