Phoenix dactylifera (date palm): 103702097
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Entry
103702097 CDS
T03274
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pda03016
]
103702097
Enzymes [BR:
pda01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
103702097
Transfer RNA biogenesis [BR:
pda03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103702097
Prokaryotic type
103702097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
103702097
NCBI-ProteinID:
XP_008782615
UniProt:
A0A8B7BP89
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Position
3:complement(4625523..4633568)
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AA seq
522 aa
AA seq
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MAAVSSVRLPFSPWLLSSPSSLALLRNSSSSCFLPNRRIFRVLCSSSSPPPPPPSTDHGG
RRWESFRKKKVVMRVGYVGTDYRGLQMQRDSHSLSTIEGELESAIFKAGGIRDSNYGNLH
KIGWVRSSRTDKGVHSLATMISLKMEIPEHAWRDDPSGMVLANCVNSNLPNNVRVFSVLP
SQKSFDARRECTVRMYSYLLPAEIVGITRECSSAEVGDHLCQFNNILKKFEGEHPFHNYT
VRSKYRKKPPKKGHIIRRSRLAEDSLAAGVEENDYLGSSEVVEAEPGKCEEHPNILCKSD
SDEEVYDSSGKLKGDFRDSESHITVRARWLHEPDEMDRLSASHFRKIIRCSCGQLETSSG
INYIELSIWGESFMLHQIRKMVGTAVAIKRVLLPEDIIELSLAKFSRIVLPLAPSEVLIL
RANCYSVRNRPGNITRPEMQIMVESEEIQKSVDEFYSSVLLPQLSKFLDPSKSPWNEWVD
NLDANTSISDTELDEVRTSWKVWKEDFLKVKEKRLSHSGACI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtctcttcggtgcgactacccttctctccatggctcctctcgagccctagc
tcgctcgccctccttcgaaactctagctcatcttgcttccttccaaaccgcagaattttc
agggttttatgctcttcttcttctcctcctcctcctcctccgtccaccgatcatggcgga
aggagatgggaatccttccgcaagaagaaggtcgtcatgcgtgtcggatatgtgggaacc
gattacagaggtcttcagatgcagcgagatagccattctttatcaacaattgaaggagaa
ttggagtctgctatcttcaaggcaggtgggattcgtgacagtaattatgggaatttgcac
aaaattgggtgggtcaggagtagcagaactgataaaggagtgcattccttggcgaccatg
atctcattgaagatggagatccctgaacatgcatggagggatgatcctagtggcatggtt
cttgcaaattgtgttaactctaacctacccaacaatgtcagagttttcagtgtattacca
tcccaaaagagttttgatgcaagaagggagtgtactgtccgcatgtattcttatctcctt
cctgctgaaattgttgggatcactagggaatgcagctctgcagaagttggcgaccatttg
tgtcaattcaacaatatactgaaaaagtttgagggagagcatcctttccataactacact
gttcgttccaaatataggaaaaaacctccaaagaaggggcacataatcagaagatcaaga
cttgctgaggattcattggctgctggtgttgaagaaaatgattatctgggaagttctgag
gttgtggaggcagaacctggtaaatgtgaagaacatccaaatattctgtgtaaaagtgac
tctgatgaggaagtatatgattcatcaggaaaactaaagggtgattttagagactcagaa
tcccatataactgttcgtgcaagatggctccatgagcctgatgaaatggatcgactcagt
gcatcccatttcagaaagatcattcgctgctcatgtggacagctggagacatcttcagga
attaattacatcgagctgtccatatggggggaatccttcatgctacatcagatccggaaa
atggtagggactgcagtggccataaagcgggttttgctaccagaagatatcatagagttg
tctttggcgaagttttctcgcattgttctaccccttgctccttccgaagttctgatcctt
agggctaactgttattctgtgagaaaccgccctggaaacatcacacggcccgagatgcaa
ataatggttgaatctgaagaaatccagaaatcagttgatgaattctactcttctgtgctg
ttgcctcagttatccaagttcttggatccatccaaatccccatggaatgaatgggtggat
aacttggatgcaaacacaagcatttcagacacagagcttgatgaagtcagaacttcatgg
aaagtatggaaagaagatttcttaaaagtgaaggaaaaacgtttgagtcatagcggtgcc
tgtatttaa
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