Pasteurella dagmatis: 4362423_01051
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Entry
4362423_01051 CDS
T05467
Symbol
uvrC
Name
(GenBank) UvrABC system protein C
KO
K03703
excinuclease ABC subunit C
Organism
pdag
Pasteurella dagmatis
Pathway
pdag03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4362423_01051 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdag03400
]
4362423_01051 (uvrC)
DNA repair and recombination proteins [BR:
pdag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4362423_01051 (uvrC)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH
HHH_5
HHH_2
WKF
HHH_3
Motif
Other DBs
NCBI-ProteinID:
SNV68873
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Position
1:complement(1117575..1119401)
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AA seq
608 aa
AA seq
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MFDAKKFLTNVPHLPGVYRMYDDKDEVIYVGKAKDLKKRLASYFRRNVGSKKTEALVASI
ARIDTTITTSETEALLLEHNYIKNYQPRYNVLLRDDKSYPYILLTSERHPRITSYRGSKK
VKGEYFGPYPHVSAVRETLALLQKLFPIRQCENSVYNNRSRPCLQYQIGRCSAPCVAGHV
SDEDYQQQVDFARLFLQGKDQQVLAHLISQMEQASQKLHFEEAARIRDQIQAVRAVIEKQ
FVSNNRIDDIDIMSIAYQLGIACVQVMFIRQGKVLGNRSYFPKVPANTDLAELTETFVGQ
FYLQAHQGRTIPNTIVVDHKLIEKKELEELLSLQAGHSVSIQDQTKGEKSKYLQLAQVNA
KSALMTQLKQSHLVEERYQALQALLGIECIQRMECFDISHTMGKQTIASCVVFDHNGPLK
SDYRRFNISGITEGDDYAAMEQALLKRYDKPLEEDKVPDVIFIDGGKGQLNRALQVFASL
KVKWNKNRPHLIGVAKGVDRKAGLETLIISKQEVELHLPVDSLALHLIQHIRDESHNHAI
SGHRKKRQQAFIQSGLETIEGIGAKRRQALLKYLGGMQGVKKATLDEIASVPGISRSLAE
KIYETLQS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcaaaaaagtttttaactaatgtgccacatttgcctggagtttatcgtatg
tatgacgataaagacgaggtgatttatgtgggtaaagcgaaagatcttaaaaagcgcttg
gctagttattttcgacgtaatgttgggagtaaaaaaacagaagcattagtggcttcaatt
gctcgtattgacactacaattactacatctgaaacagaagctttattacttgagcataac
tacattaaaaattatcagccacgttacaatgttttgttacgtgatgataaatcttatcct
tatattttattgactagcgaacgtcaccctcgaattacttcttatcgtggtagtaaaaaa
gtaaaaggggaatatttcggtccttatccacatgtgagtgctgtacgtgaaactcttgct
ttattacagaaattgttccctattcgtcaatgtgaaaactctgtttataacaatcgatct
cgcccttgtttacaatatcaaattgggcgctgctcagcaccttgcgttgcaggccatgtc
agcgatgaagattatcaacagcaagtagattttgctcgtttatttttgcaaggaaaagat
caacaagttttagcacatttaatttctcaaatggaacaagctagccaaaagcttcatttt
gaagaagctgcacgtattcgagatcaaatccaagcggtgagagccgttattgaaaaacaa
tttgtttcaaataatcgtattgatgatattgatattatgtccattgcttatcaattaggt
attgcttgtgttcaagtgatgtttattcgtcaaggtaaagtgcttggaaatcgtagctat
tttcctaaagtcccggctaataccgatttggctgagttaaccgaaaccttcgtaggacaa
ttttatttacaagctcatcaaggtagaacaataccgaatacaattgtcgttgaccataaa
ttaatagaaaaaaaagagttagaagaattattaagcttacaagcaggccatagcgtcagt
attcaagatcaaacaaaaggtgaaaaaagtaaatatctgcagctagcacaagtaaatgca
aaatcagcattaatgacacagttaaaacaaagtcaccttgtagaggagcgttatcaagca
ctacaagcattattggggattgaatgcattcaacgtatggaatgttttgatattagccat
acaatgggaaagcaaacgattgcatcttgtgttgtgtttgatcacaatgggccgctaaaa
tcagattaccgtcgttttaatatttcaggtatcacagaaggagatgattacgcagcaatg
gagcaggcattattgaaacgttatgataaacctttagaagaagataaagtgcctgatgtg
atctttattgatggcggaaaagggcaacttaatcgtgctttacaagtatttgcttccctt
aaagtaaaatggaataaaaatcgaccgcacttaattggtgttgcaaaaggcgtagataga
aaagccggtttagaaaccttgatcatcagtaaacaagaagtcgaattacatttaccagta
gatagcttagcattgcatttaattcaacatattcgtgatgaaagccataatcatgcaatt
agtggacatcgtaaaaaacgtcagcaggcctttatccaaagtggtttagagactatcgaa
ggcattggagcaaaacgtcgacaagctttattgaaatatttaggcggaatgcagggcgtg
aaaaaagccactttagatgaaattgcttctgtaccagggatttctcgttcactggcagaa
aagatctacgaaacactacaaagttaa
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