KEGG   Pocillopora damicornis (lace coral): 113675980
Entry
113675980         CDS       T05773                                 
Name
(RefSeq) lysine-specific histone demethylase 1A-like isoform X1
  KO
K11450  [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:1.14.99.66]
Organism
pdam  Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdam03036]
    113675980
Enzymes [BR:pdam01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.99  Miscellaneous
    1.14.99.66  [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
     113675980
Chromosome and associated proteins [BR:pdam03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    BRAF-HDAC complex
     113675980
    REST complex
     113675980
   Histone demethylases
    113675980
SSDB
Motif
Pfam: Amino_oxidase SWIRM NAD_binding_8 DAO Pyr_redox_2 Pyr_redox FAD_oxidored FAD_binding_2 FAD_binding_3 AlaDh_PNT_C Thi4 HI0933_like MRPL52 Lycopene_cycl MurD-like_N NAD_binding_9 Pyr_redox_3 GIDA
Other DBs
NCBI-GeneID: 113675980
NCBI-ProteinID: XP_027048387
LinkDB
Position
Unknown
AA seq 830 aa
MSGSYPPPILPKPPVGLPFIAPKPNMPGQGVNASQSGSNSLEEKRQNGGSPSQRTDAEMF
DLESEIARRTSQRKRPKVEYTEVDVKLANLTDEEMSDDEIIRTTTRASPVPPVMEAEEPR
EVEEEDDEEDVPEGLEGAAFQSRLPFDKMTSQEASCFPDVSQGPPPVQKQFLYIRNRMLQ
LWVENPRQQMTLEHAMSQMDPQNSDPKLAARVHAFLSRYGLINFGIYKVLKMPAALKKSP
KVIVVGSGISGLAAARQLQSFGIEVTIVEARERVGGRVATFRKGQYIADLGAMVLTGLGG
NPLTVLANQINMDLHKIRQKCPLYETHGKSGPLEKKANSRLAAVRVPKEKDEMVEREFNR
LLEATSYLSHQIDFNYMNSKPVSLGHALELVIKMQERHVKEQQIEHAKKILNIQEQLKAN
LAQMVQTKEKVKQTHKEYQEALKVKEPRDVTSEFLVKSKLRDLNALCREYDEMAEEQLRI
EERLEELEDNPPSDVYLSSRDRQILDWHFANLEFANATPLTSLSLKHWDQDDDFEFSGSH
MTVRNGYSCLPAALAEGLDIRLNTAVRHVRYNRTGVEIVTQSTSKSSITTTQTFKGDAVL
ITLPLGVLKSHPSGVQFHPPLPEWKTAAIHRMGFGNLNKVVLCFDRVFWDPNTNLFGHVG
STTANRGELFLFWNLYKSPVLIALVAGEAANKLENVSDEIIVGSAIAVLKGIFGSSAVPQ
PKETVVTRWKSDEWSRGSYSFVAAGSSGNDYDLMASPVAPPPVSGMPPGNPAPPNPPRVF
FAGEHTIRNYPATVHGALLSGLREAGRIADQFLGLPYEVNRIGQPPMTQA
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgtcgggttcatatccacctccaattcttcctaagcctccagtcggccttcctttcata
gcacctaaaccaaatatgccaggtcagggtgtgaatgcaagtcagtcaggctctaacagt
ctcgaagaaaaacggcagaatggaggtagtccgagccaaagaaccgatgctgaaatgttc
gatttagaaagtgaaattgccagaaggacaagtcagcgaaagcggcctaaagtggaatac
acagaagtagatgtaaaattagctaacttgacggacgaggaaatgtcggatgatgaaatc
atcagaaccaccacaagggcatcaccagtccctccagttatggaggctgaagaaccacgt
gaagtagaagaggaggatgatgaagaagatgttcctgaaggacttgagggtgcagctttc
caaagtagattgccttttgataagatgacatcacaagaggcatcatgtttcccagatgtc
tctcagggccctccccctgtccagaaacagtttttatacatcaggaatagaatgctacaa
ctatgggttgaaaacccacgacaacagatgacattggagcatgcaatgtcacaaatggac
cctcaaaatagtgatcccaaacttgcagccagagtacatgccttcctttcacgatatggc
ttgataaactttggaatttacaaggttcttaagatgccagctgcattaaaaaagtcaccc
aaagtgatagttgttggttcaggaatctctggtcttgcagctgcacggcagttacagtct
tttggaattgaggtcactattgtagaagcgagggaacgtgtgggaggaagggtagcaaca
ttccgtaaaggacagtacattgcagatcttggggccatggtactcactgggttaggggga
aatcctttgacagttctggcaaatcaaatcaatatggatcttcataagattagacaaaag
tgtccattgtatgaaactcatggaaagtcgggcccacttgaaaagaaggccaacagccgg
cttgctgctgtgagggtacctaaagagaaagatgagatggtggaaagggagttcaacagg
ttgctggaagccacatcatatttgtcacatcaaattgactttaactacatgaacagcaaa
cctgtgtctttgggccatgccctggaacttgtgatcaagatgcaagagaggcatgttaag
gagcagcagatcgaacatgcaaaaaagattctcaatattcaagagcaactgaaggctaac
ttagcccagatggtgcagactaaggagaaagtcaagcaaactcataaggaataccaagag
gccctcaaggtcaaagaaccaagggatgtcacatcagagtttttggtgaaaagcaagcta
agagacctgaatgccctttgcagggaatatgatgaaatggcagaggagcagcttcgtatt
gaggagagacttgaagaacttgaagataacccaccgagtgatgtttacttatcatcaaga
gaccgacagatcctagactggcattttgctaatctagagtttgcaaatgccacgcccttg
acatcactgtcacttaaacactgggaccaagatgatgattttgagttcagtggcagtcat
atgactgttcgtaatggttactcttgtcttcctgctgctttggctgaaggacttgatatc
agactcaacactgcagtgagacatgtgcgctataacagaactggtgtagaaattgtcacc
cagagcacaagcaagtcatcaatcactacaacacagacatttaagggagatgctgtgttg
ataacacttccacttggagtactcaaaagccatccatcaggtgtgcagtttcaccctccc
ctcccagagtggaagactgctgctatacacagaatgggctttggaaatttaaacaaggtg
gttctttgctttgatcgagtgttctgggatccaaacaccaacctgtttggtcacgttgga
agtacaacggcgaaccgtggtgagcttttcctgttttggaatctgtacaagtcaccagtg
cttattgctctagtggctggtgaagctgccaataagctggaaaatgtgtctgatgaaatt
attgtgggaagtgctattgcagtcttaaaaggaatatttgggagcagtgctgttcctcag
cctaaagagacagttgtaacaaggtggaagtcagatgagtggtcacgaggctcttactcc
tttgttgctgctggttcttcaggaaatgactatgatctcatggcttctccagtggcacct
ccaccagtatcagggatgcctccaggtaatcctgccccacccaatcctcccagagtgttc
tttgcaggggagcatacaatacggaattatcctgccacagtacatggagctcttttgagt
ggcttgagagaggctggcagaattgcagaccagtttttgggactcccttatgaagtaaac
agaattgggcagccacccatgacccaggcctaa

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