Pocillopora damicornis (lace coral): 113675980
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Entry
113675980 CDS
T05773
Name
(RefSeq) lysine-specific histone demethylase 1A-like isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdam03036
]
113675980
Enzymes [BR:
pdam01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
113675980
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
113675980
REST complex
113675980
Histone demethylases
113675980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
Pyr_redox
FAD_oxidored
FAD_binding_2
FAD_binding_3
AlaDh_PNT_C
Thi4
HI0933_like
MRPL52
Lycopene_cycl
MurD-like_N
NAD_binding_9
Pyr_redox_3
GIDA
Motif
Other DBs
NCBI-GeneID:
113675980
NCBI-ProteinID:
XP_027048387
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MSGSYPPPILPKPPVGLPFIAPKPNMPGQGVNASQSGSNSLEEKRQNGGSPSQRTDAEMF
DLESEIARRTSQRKRPKVEYTEVDVKLANLTDEEMSDDEIIRTTTRASPVPPVMEAEEPR
EVEEEDDEEDVPEGLEGAAFQSRLPFDKMTSQEASCFPDVSQGPPPVQKQFLYIRNRMLQ
LWVENPRQQMTLEHAMSQMDPQNSDPKLAARVHAFLSRYGLINFGIYKVLKMPAALKKSP
KVIVVGSGISGLAAARQLQSFGIEVTIVEARERVGGRVATFRKGQYIADLGAMVLTGLGG
NPLTVLANQINMDLHKIRQKCPLYETHGKSGPLEKKANSRLAAVRVPKEKDEMVEREFNR
LLEATSYLSHQIDFNYMNSKPVSLGHALELVIKMQERHVKEQQIEHAKKILNIQEQLKAN
LAQMVQTKEKVKQTHKEYQEALKVKEPRDVTSEFLVKSKLRDLNALCREYDEMAEEQLRI
EERLEELEDNPPSDVYLSSRDRQILDWHFANLEFANATPLTSLSLKHWDQDDDFEFSGSH
MTVRNGYSCLPAALAEGLDIRLNTAVRHVRYNRTGVEIVTQSTSKSSITTTQTFKGDAVL
ITLPLGVLKSHPSGVQFHPPLPEWKTAAIHRMGFGNLNKVVLCFDRVFWDPNTNLFGHVG
STTANRGELFLFWNLYKSPVLIALVAGEAANKLENVSDEIIVGSAIAVLKGIFGSSAVPQ
PKETVVTRWKSDEWSRGSYSFVAAGSSGNDYDLMASPVAPPPVSGMPPGNPAPPNPPRVF
FAGEHTIRNYPATVHGALLSGLREAGRIADQFLGLPYEVNRIGQPPMTQA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttcatatccacctccaattcttcctaagcctccagtcggccttcctttcata
gcacctaaaccaaatatgccaggtcagggtgtgaatgcaagtcagtcaggctctaacagt
ctcgaagaaaaacggcagaatggaggtagtccgagccaaagaaccgatgctgaaatgttc
gatttagaaagtgaaattgccagaaggacaagtcagcgaaagcggcctaaagtggaatac
acagaagtagatgtaaaattagctaacttgacggacgaggaaatgtcggatgatgaaatc
atcagaaccaccacaagggcatcaccagtccctccagttatggaggctgaagaaccacgt
gaagtagaagaggaggatgatgaagaagatgttcctgaaggacttgagggtgcagctttc
caaagtagattgccttttgataagatgacatcacaagaggcatcatgtttcccagatgtc
tctcagggccctccccctgtccagaaacagtttttatacatcaggaatagaatgctacaa
ctatgggttgaaaacccacgacaacagatgacattggagcatgcaatgtcacaaatggac
cctcaaaatagtgatcccaaacttgcagccagagtacatgccttcctttcacgatatggc
ttgataaactttggaatttacaaggttcttaagatgccagctgcattaaaaaagtcaccc
aaagtgatagttgttggttcaggaatctctggtcttgcagctgcacggcagttacagtct
tttggaattgaggtcactattgtagaagcgagggaacgtgtgggaggaagggtagcaaca
ttccgtaaaggacagtacattgcagatcttggggccatggtactcactgggttaggggga
aatcctttgacagttctggcaaatcaaatcaatatggatcttcataagattagacaaaag
tgtccattgtatgaaactcatggaaagtcgggcccacttgaaaagaaggccaacagccgg
cttgctgctgtgagggtacctaaagagaaagatgagatggtggaaagggagttcaacagg
ttgctggaagccacatcatatttgtcacatcaaattgactttaactacatgaacagcaaa
cctgtgtctttgggccatgccctggaacttgtgatcaagatgcaagagaggcatgttaag
gagcagcagatcgaacatgcaaaaaagattctcaatattcaagagcaactgaaggctaac
ttagcccagatggtgcagactaaggagaaagtcaagcaaactcataaggaataccaagag
gccctcaaggtcaaagaaccaagggatgtcacatcagagtttttggtgaaaagcaagcta
agagacctgaatgccctttgcagggaatatgatgaaatggcagaggagcagcttcgtatt
gaggagagacttgaagaacttgaagataacccaccgagtgatgtttacttatcatcaaga
gaccgacagatcctagactggcattttgctaatctagagtttgcaaatgccacgcccttg
acatcactgtcacttaaacactgggaccaagatgatgattttgagttcagtggcagtcat
atgactgttcgtaatggttactcttgtcttcctgctgctttggctgaaggacttgatatc
agactcaacactgcagtgagacatgtgcgctataacagaactggtgtagaaattgtcacc
cagagcacaagcaagtcatcaatcactacaacacagacatttaagggagatgctgtgttg
ataacacttccacttggagtactcaaaagccatccatcaggtgtgcagtttcaccctccc
ctcccagagtggaagactgctgctatacacagaatgggctttggaaatttaaacaaggtg
gttctttgctttgatcgagtgttctgggatccaaacaccaacctgtttggtcacgttgga
agtacaacggcgaaccgtggtgagcttttcctgttttggaatctgtacaagtcaccagtg
cttattgctctagtggctggtgaagctgccaataagctggaaaatgtgtctgatgaaatt
attgtgggaagtgctattgcagtcttaaaaggaatatttgggagcagtgctgttcctcag
cctaaagagacagttgtaacaaggtggaagtcagatgagtggtcacgaggctcttactcc
tttgttgctgctggttcttcaggaaatgactatgatctcatggcttctccagtggcacct
ccaccagtatcagggatgcctccaggtaatcctgccccacccaatcctcccagagtgttc
tttgcaggggagcatacaatacggaattatcctgccacagtacatggagctcttttgagt
ggcttgagagaggctggcagaattgcagaccagtttttgggactcccttatgaagtaaac
agaattgggcagccacccatgacccaggcctaa
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