Clostridioides difficile 630: CDIF630_00240
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Entry
CDIF630_00240 CDS
T03885
Symbol
spoIID
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
pdc
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdc01011
]
CDIF630_00240 (spoIID)
Enzymes [BR:
pdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CDIF630_00240 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CDIF630_00240 (spoIID)
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GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
AJP09819
UniProt:
Q18CL6
Structure
PDB
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All DBs
Position
174817..175881
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AA seq
354 aa
AA seq
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MKNPLVVLLGFVTCSVLVPSLITLVSYKNVELTEKPESPVSINKTIKKSDIEDKGNKEEK
NTVNYETVNKKAPIINVYNHITGKTEKMDMENYLCGVLAGEMSSEFDIEALKAQSVAART
YVVYKQEHGKSSKHKNAVVCTDYKHCQEYKSYDTLKKLNGEEWIKNKYSKIQEAVRGTKG
QIITYNDKAILPLYFSTSSGKTENSEEVFSAKYPYLKSVESPYDKYSPKFASTLKISNTD
FVKSLRRAYSTIVIDVNNLSKQVSITKRSDAGTVEKIKLGNKELTGKDIRTVFKLNSANF
DIKFGEGYIDFVVKGYGHGVGMSQWGAEGMAEEGYKYYDILSHYYTDTKIKDIY
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacccattggttgttttgttaggatttgtgacttgctctgtgttagttccatca
cttataactttagtttcttataaaaatgtagaattaactgaaaaaccagagagcccagta
tctataaacaaaactattaaaaaaagtgatattgaagacaaaggtaataaagaagaaaaa
aatacagtgaactatgaaactgtaaataaaaaagcaccaattatcaatgtatataatcat
ataacagggaaaaccgaaaagatggacatggagaactatttatgtggagtactagctggt
gagatgtcttcagagtttgatatagaagctttaaaagctcaatctgtagcagctagaaca
tatgtagtatataaacaagaacatggtaaatctagtaaacataaaaatgcagtagtatgt
actgattataaacattgtcaagaatataagagttatgatactcttaaaaaattaaatggt
gaagaatggattaagaataaatattccaaaatccaagaagcagttagaggaactaaaggt
caaataataacttataatgataaggcgatacttcctctttatttttctacatcttcagga
aaaacagaaaatagtgaagaagtattttctgcaaaatatccttatttaaagtctgtggaa
agtccttatgataagtattcccctaaatttgcgtcaacacttaaaataagtaacacagat
tttgttaaaagtcttagaagggcatatagcactattgtgatagatgtgaataatttaagt
aaacaagtttcaataactaaaagaagtgatgccggaactgtagaaaaaataaaattagga
aataaagaattgactggaaaagacattagaactgtttttaaattgaactctgcaaacttt
gacataaaatttggagaaggatacatagatttcgtggtaaaaggatatggtcatggtgtt
ggtatgagccagtggggagcagaaggaatggcagaagagggctataaatattatgatata
ttatcacattactacacagatacaaaaataaaagatatatactaa
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