Clostridioides difficile 630: CDIF630_03101
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Entry
CDIF630_03101 CDS
T03885
Symbol
glyA2
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc00260
Glycine, serine and threonine metabolism
pdc00460
Cyanoamino acid metabolism
pdc00630
Glyoxylate and dicarboxylate metabolism
pdc00670
One carbon pool by folate
pdc00680
Methane metabolism
pdc01100
Metabolic pathways
pdc01110
Biosynthesis of secondary metabolites
pdc01120
Microbial metabolism in diverse environments
pdc01200
Carbon metabolism
pdc01230
Biosynthesis of amino acids
pdc01240
Biosynthesis of cofactors
Module
pdc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CDIF630_03101 (glyA2)
09102 Energy metabolism
00680 Methane metabolism
CDIF630_03101 (glyA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDIF630_03101 (glyA2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CDIF630_03101 (glyA2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CDIF630_03101 (glyA2)
Enzymes [BR:
pdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CDIF630_03101 (glyA2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
DUF6445
Motif
Other DBs
NCBI-ProteinID:
AJP12582
UniProt:
Q183S3
LinkDB
All DBs
Position
complement(3296262..3297518)
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AA seq
418 aa
AA seq
DB search
MLKTTKISDPELYKIVADELVRQEHNIEMIASESTAPTEVLELSGCVFTNKTEEGYPGAR
FQAGSEEADKLETLAIKRAKEVFGAEHVNVQPYSGSTANYCVYSSILKPNDTVLSMRLDQ
GGHLTHGSAVNFLHDIYKYEFYGVDPNTGRIDYDALEAKAKECRPKLIIAGASSYPRLID
YERISKVAKEVGAYFMVDMAHVAGLVAAKVIPSPVPYADFVSSSTTKTFCGPRSGIVLCK
AEHAKKLDKGVFPGTLGSIHLNTVAAKAFSLLYLSTDKFKKIMEQVVVNAQTLASELISH
GFSIVSGGTDNHIVMVDLRSKNLTGKQFEKALEYVGITVNKNVIPDDPQSPFVTSGVRIG
LTSISQRGLKEKEVIQIAGIMNKVAENIDNKEVLDECKAEAQELISKFPLYPEGYFED
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaacaacaaaaatttcagacccagagttatacaagattgtagctgatgagttg
gttagacaagaacacaatattgagatgatagcttctgaaagtacagcaccaacagaagta
cttgaattaagtggatgtgtatttacaaataaaacagaagaaggctatccaggggctcgt
tttcaagcaggttctgaagaagcagataaacttgaaaccctagcaataaaacgtgcaaaa
gaagtatttggagcagaacatgtaaacgtacaaccgtattcaggttctacagctaactat
tgtgtatattcatcaatattaaaaccaaatgacactgttttaagtatgcgtcttgaccaa
ggtggacacttgacacatggtagcgcagttaattttttacatgacatttataaatatgaa
ttttatggggtagacccaaatactggacgtatagattatgatgctcttgaagcaaaggca
aaagaatgtagaccaaaacttataattgcaggggcaagttcatatccaagattaatagat
tatgaaagaatatcaaaggttgcaaaagaagtaggagcttactttatggtagatatggca
catgttgcaggattagtcgcagcgaaagtaatacctagtcctgtaccttatgcagatttt
gtttcttcatctacgacaaagactttctgtggaccaagaagtggtattgtactttgtaaa
gcagaacatgcaaagaaactcgataaaggtgtttttccaggaacattagggtctatacat
cttaatacagttgcagcaaaagccttttcactattatatttaagtacagataaatttaaa
aagataatggagcaagttgtagtaaatgctcagactctagcttctgaactgatttcacat
ggttttagtattgtaagtggaggtactgataatcatatagtaatggttgacttaagaagt
aagaatcttacaggaaaacaatttgaaaaagctcttgaatatgtaggaataacagttaat
aaaaatgttatacctgacgacccacaatcaccatttgtaactagtggtgttcgtataggt
cttacatcaatatctcaaagaggtctgaaagaaaaagaagttatacagatagcagggata
atgaataaggtagcagaaaatattgataataaagaagtattagatgaatgtaaagcagag
gcacaagaacttatatctaagtttccattatatccagaagggtattttgaagattaa
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