Paracoccus denitrificans: Pden_0827
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Entry
Pden_0827 CDS
T00440
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pde
Paracoccus denitrificans
Pathway
pde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pden_0827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pde03400
]
Pden_0827
DNA repair and recombination proteins [BR:
pde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Pden_0827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABL68939
UniProt:
A1B095
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Position
1:complement(802307..804943)
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AA seq
878 aa
AA seq
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MSDQPTPMMAQYLAIREANPGALLFYRMGDFYEMFFEDAVAAAAALDIALTKRGTHLGEP
IPMCGVPVHAAESYLLTLIRKGFRVAIAEQMEDPAEAKKRGSKSVVARDVVRLVTPGTLT
EESLLEARRHNFLASFASVRDESALAWVDISTGAFRVMPCPPARLAPELARHAPRELLAA
EGANLDEIAAEAGAALTELPGGSFDSSAATRRLCALFSVETLDGFGQFSRAELAAMGAIA
DYLELTQKGRMPLIRPPVREALGGAMQIDAATRRNLELTQALSGGREGSLLAAIDRSVTA
GGARLLERRISAPSRDLDEIHARQAAVAHLVDEPRLTADLREALSRAPDMDRALSRLALE
RGGPRDLAAIRAGLTQGAAIAAMLGNDEIAVLAEAAHDLTGHDALIDLLDEALVAEPPLL
ARDGGFVAPGYDEDLDETRRLRDEGRGVIARMQADYIAETGVQSLKIKHNNVLGYFIETT
STHAERMLAPPLNERFIHRQTTANQIRFTTVELSELETRILNARDRALEIEREIFARLSR
AVLDRAGPVGQAARALAEIDLTAAFADLASGEGWVRPEVDASRAFVIEGGRHPVVERALK
RKGEAFVANDCALTQGETPAIWLLTGPNMAGKSTFLRQNALIAILAQAGGFVPARRAHIG
LVSQLFSRVGAADDLARGRSTFMVEMVETAAILNQADDHALVILDEIGRGTATWDGLSIA
WAVMEHLHATNRCRALFATHYHEMTSLSARLPGVENATVAVREWEGEVIFLHEVRKGAAD
RSYGVQVARLAGLPPSVVDRARDILHQLESGERQGTGKPAALLDDLPLFRAAPAPAPAGK
AKPSVVEDRLRSLNPDTISAREALDLVYELRGMLDGEP
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccaacccactccgatgatggcgcagtatctcgcgatccgcgaggccaatccc
ggcgcgctgctgttctatcgcatgggcgatttctacgagatgttcttcgaggacgcggtg
gccgccgccgccgccctcgacatcgcgctgacgaaacgcggcacccatctgggcgagccg
atcccaatgtgcggcgtgccggtccatgccgccgaaagctacctgctgacgctgatccgc
aagggcttccgcgtcgccatcgccgagcagatggaggatccggccgaggccaagaagcgc
ggcagcaaatccgtcgtcgcccgcgatgtggtgcggctcgtcacccccggcacgctgacc
gaggaatcgctgctggaggcgcggcggcacaatttcctggccagctttgccagtgtgcgc
gatgaatcggcgctggcctgggtggacatctcgaccggcgccttccgcgtcatgccctgc
ccgccggcgcggctggcccccgaactcgcccgccacgcgccacgcgaattgctggcggcc
gagggcgcgaacctcgatgagatcgccgccgaggcgggggccgcgctgacggaactgccc
ggcggcagcttcgacagcagcgcggcgacgcgccggctgtgcgcgctgttttcggtcgag
acgctggacgggttcggccagttttcccgcgccgaactggccgccatgggtgccatcgcc
gattacctggaactgacgcaaaagggccggatgccgctgatccgcccgccggtgcgcgag
gcgcttggcggcgccatgcagatcgacgccgcgacacgccgcaacctggagctgacgcag
gccctgtccggcgggcgcgagggcagcctgctggccgccatcgaccgcagcgtgacggcg
ggcggcgcgcggctgctggaacgccgcatcagcgccccctcgcgcgacctggacgaaatc
cacgcccggcaggcggcggtggcgcatctggtggacgagccgcgcctgaccgccgatctg
cgcgaggcgctgtcgcgcgcgcccgacatggaccgtgccctctcgcgactggcgctggag
cggggcgggccgcgcgacctggccgcaatccgcgccgggctgacgcaaggcgcggccatc
gccgcaatgctgggcaacgacgagatcgccgtgctggccgaggcggcgcacgacctgacc
ggccacgacgcgctgatcgacctgctggacgaggcgctggtggccgaaccgcccttgctg
gcgcgcgacggcggctttgtcgcgccgggctatgacgaggacctggacgaaacccgccgc
ctgcgcgacgagggccgcggcgtcatcgcccgcatgcaagccgactatatcgcagagacc
ggcgtgcagagcctgaagatcaagcataacaacgtcctgggttacttcatcgagacgact
tcgacccatgcggaacggatgctggccccgccgctgaacgagcggttcatccaccgccag
accacggcgaaccagatccgcttcaccacggtcgagctgtccgaactggaaacccgcatc
ctcaacgcccgcgaccgcgcgctggagatcgagcgcgagatctttgcccgcctgtcccgc
gccgtgctggaccgggccggccccgtcgggcaggcggcccgcgcgctggccgagatcgac
ctgaccgccgctttcgccgacctcgcctcgggcgagggctgggtgcgccccgaggtcgat
gccagccgcgccttcgtgatcgagggcggccggcacccggtcgtggagcgtgcgctcaag
cgcaagggcgaggctttcgtcgccaacgactgcgcgctgacccagggcgagaccccggcg
atctggctgctgaccggcccgaacatggccggaaaatcgacctttctgcgccagaatgcg
ctgatcgccatcctcgcgcaggcgggcggcttcgtgcccgcgcgccgcgcccatatcggg
ctggtcagccagcttttcagccgcgtcggcgcggcggacgacctggcgcgcggccgctcg
accttcatggtcgagatggtcgagacggcggcgatcctgaaccaggccgacgaccatgcg
ctggtgatcctggacgagatcgggcgcggcaccgcgacctgggacgggctcagcatcgcc
tgggcggtgatggagcatctgcatgccacgaaccgctgccgggcgctgttcgccacgcat
taccacgagatgacatcgctgtcggcgcgcctgcccggcgtcgagaacgccaccgtcgcg
gtgcgcgaatgggagggcgaggtgatcttcctgcacgaggtcaggaagggcgccgccgac
cgctcctatggcgtgcaggtggcgcggctggcggggctgccgccctcggttgtggaccgc
gcccgcgatatcctgcaccagctggaaagcggcgagcggcagggcaccggcaagcccgcc
gcgctgctcgacgacctgccgctgttccgcgccgcgccggcccccgcacccgcgggcaag
gcgaagccctcggtggtcgaggaccgcctgcgcagcctgaaccccgacacgatcagcgcc
cgcgaggcgctggacctggtctatgaactccgcggcatgctggatggcgagccgtga
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