Paracoccus denitrificans: Pden_1578
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Entry
Pden_1578 CDS
T00440
Name
(GenBank) peptidase S13, D-Ala-D-Ala carboxypeptidase C
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pde
Paracoccus denitrificans
Pathway
pde00550
Peptidoglycan biosynthesis
pde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pden_1578
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pde01002
]
Pden_1578
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pde01011
]
Pden_1578
Enzymes [BR:
pde01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pden_1578
Peptidases and inhibitors [BR:
pde01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
Pden_1578
Peptidoglycan biosynthesis and degradation proteins [BR:
pde01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Pden_1578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
ABL69678
UniProt:
A1B1N0
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All DBs
Position
1:complement(1553348..1554802)
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AA seq
484 aa
AA seq
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MNGWTRRGFMAGLGLLALAPRMAPAQQRPAVRPTGFDPEALIAAAGLGGAVAYAVIDPAS
GQVLAERQPEPSMAPASTLKAVTALYALDRLGERHRFATRVIRAGNTLILAGGGDPVLDT
DALDELAAAAVADEQAAGRPAPTAFAVWGGALPRIGRLDPAQDEHLPYNPSISGMILNFN
RVHLDWRRGDKGYQLSLQARGRKLSPRAYTTAIAAVDRGLPLFTYEAGKLESWTIARSSL
GKSGSRWLPVRRPELYAGDVFQTLCRARGLALPNPEVIEILPEGAEIARHESPDLRRIVR
DMMEYSTNLTAEVIGLAASRAGDVGASAAAMADWLRGQGIGGDFAFHDHSGLSPLNRVNA
GMLAALVAGPGRTRDLRGLMKLIPLRDARGKRKDSDIRIEAKTGTLNFVSNLAGYAQAPD
GRELGFAILTADEDRRAASEGQELPEGVAGWTKRSKALQQALIEGWLGEFAGQAPVASVQ
GATL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacggatggacgcggcgcggcttcatggcggggctggggcttctggccctggcgccg
cgcatggcgccggcgcagcaaaggccggcggtgcggcccacgggcttcgaccccgaggcg
ctgatcgctgccgcgggccttggcggagcggtggcctatgcggtgatcgacccggcctcg
gggcaggtgctggccgagcgccagcccgagccttccatggcgccggcaagcacgctgaag
gccgtgacggcgctttacgcgctggaccggctgggcgagaggcaccgttttgccacccgc
gtcatccgggccggcaatacgctgatcctggcgggtgggggcgatccggtgctggacacc
gatgcgctggacgaactcgccgccgcggccgtcgcggatgaacaggccgccggccgcccg
gcaccgaccgcattcgccgtctggggcggggcgctgccgcgtatcggccggctggacccg
gcgcaggacgagcatctgccctacaacccctcgatctcggggatgatcctgaacttcaac
cgcgtgcatctggactggcggcgcggcgacaagggctatcagctttcgttgcaggcgcgg
ggccgcaagctttcgccccgggcctatacgaccgccatcgcggcggtggaccgcgggctg
ccgctgttcacctatgaggcgggcaagttggaaagctggaccatcgcgcgcagcagcctg
ggcaagtccggcagccgctggctgcccgtccgccgccccgagctttacgccggcgacgtg
ttccagacgctttgccgcgcgcgcggtctggcgctgcccaatcccgaggtgatcgagatc
ctgcccgaaggggccgagatcgcgcgccacgaaagcccggacctgcgccggatcgtgcgg
gacatgatggaatattcgaccaacctgaccgccgaggtgatcggccttgccgccagccgc
gcgggcgacgtgggggcctcggccgcggccatggcggattggctgcgcgggcaggggatc
ggcggcgacttcgcctttcacgaccattccggcctgtcgcccctgaaccgcgtcaacgcg
ggcatgctggccgcgctggtggccgggccgggccggacgcgcgatctgcgcgggctgatg
aagctgatcccgctgcgggacgcgcgcggcaagcgcaaggacagcgacatccgcatcgag
gccaagaccgggacgctgaacttcgtctcgaacctggcgggttatgcacaggcccccgac
ggccgggaactgggctttgccatcctgaccgccgacgaggatcgccgtgccgcaagcgag
ggccaggagctgcccgagggcgtcgccggctggaccaagcgttccaaggcgttgcagcag
gcgctgatcgagggctggctgggcgaattcgccgggcaggcccccgtcgcctcggtgcag
ggggcgacgctttaa
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