KEGG   Paracoccus denitrificans: Pden_4556
Entry
Pden_4556         CDS       T00440                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pde  Paracoccus denitrificans
Pathway
pde03030  DNA replication
pde03430  Mismatch repair
pde03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pden_4556
   03430 Mismatch repair
    Pden_4556
   03440 Homologous recombination
    Pden_4556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pde03032]
    Pden_4556
   03400 DNA repair and recombination proteins [BR:pde03400]
    Pden_4556
Enzymes [BR:pde01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pden_4556
DNA replication proteins [BR:pde03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Pden_4556
DNA repair and recombination proteins [BR:pde03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Pden_4556
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RNase_H_2 DEDDh_C PAS
Other DBs
NCBI-ProteinID: ABL72619
UniProt: A1BAS5
LinkDB
Position
p1:38314..40293
AA seq 659 aa
MLTRLSLRARVLLIFAGLAGAVLAVLAAGLWVAGASLAGRGVPVQAMLDALALAALIVGF
GALGMIVWIWFLFDRNVARPIELLAGGLRTGQTPEIEEARYLADLGPAARDAAEARARSA
EALADAVAEHAADLQREKETLESILADIGAGAVMTDPAGRVMFYNASAAHLLPGIALDRP
IERHLPGGALEAGAARLAAGAAATDLTCLTSAGQRLWGRMRRVDGGTLLILNDRPPQHPA
PRDLLETLRRHAATLVPMLGALEGPIPPALAQAIQSEGQGLANVLRELTEAMSGDATRGG
AGLNELAAGLDLAPDQPRLVLLADAAGVNGLLRHLDRRLREQGAAPRLAAEAGAEAEASE
ARLLLLWTGAALPMDRLEAWLAEPPDPAQPELTGHEILAAHATGIWTEARDGQARLVLPL
PIAAGRPDSAGLTYDFALSRRGATSSRLADLTCVVFDTETTGLDPVADRIVQIAGLRIAR
GRLTGERFDTLVDPGRPIPPASTAVHGITDAMVAGAPDMTAALTAFHHFAEDTVLVAHNA
PFDMGFLRRAVPETGAHFDNQVLDTVLLSAMLWGQSAPHSLDALTERLGIVIPPEARHTA
MGDARATAEAYLRLIAALEAKGLDRFEDVLAEARRHRRLVDDANKPAGDAASGSGPSAG
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgctgacgcggctgtcgctgagggcccgggttctgctgatctttgccgggcttgcgggc
gccgtcctcgcggtcctggcggcggggctgtgggtggcgggggcaagcctcgcgggccgg
ggcgtcccggtccaggcgatgctggacgcgctggcgcttgcggcgctgatcgtggggttc
ggtgcgctggggatgatcgtctggatctggttcctgttcgaccgcaacgtggcccgcccg
atcgagctgctggccgggggcttgcgcaccggccagacccccgagatcgaggaggcccgc
tatcttgccgatctgggccccgccgcacgcgacgccgccgaggcgcgggcgcgttcggca
gaggcactggccgatgcggtcgccgaacatgccgccgacctgcaacgcgaaaaggagacg
ctggaatccatccttgccgatattggtgccggcgcggtgatgaccgatccggccggccgg
gtgatgttctacaatgcctccgccgcgcatcttctgcccggcatcgcgctggaccgcccc
atcgagcgccatctgcccggcggtgcgttggaggccggggcggcgcggctggcggcgggg
gcggcggcgaccgacctgacctgcctgacctcggccgggcagcggctgtgggggcgcatg
cggcgggtcgatggcggcacgctgctgatcctgaacgaccgtccgccgcagcaccccgcg
ccgcgcgacctgctggagactctgcgccgccatgccgcgaccctggtgccgatgctgggt
gcgttggagggaccgatcccgcccgcgctggcgcaggcgatccagagcgaggggcaggga
ttggccaacgtcctgcgcgaactgaccgaggcgatgagcggcgacgccacgcgcggaggg
gcggggctgaacgaactggctgccgggctggacctggcgcccgaccagccccggctggtg
ctgctggccgacgcggccggcgtgaacgggctgctgcgccatctggaccgccgcctgcgc
gagcagggtgcggccccccgccttgccgccgaggccggggccgaggccgaggcgtccgag
gcgcggctcttgctgctctggaccggggcggcgctgcccatggaccggctggaggcctgg
ctggccgagccgcccgatccggcgcagcccgaactgaccgggcacgagatcctggccgcg
catgccaccggcatctggaccgaggcgcgggacggtcaggcgcggctggtcctgccgctg
ccgatcgcggcgggccggccggacagcgccgggctgacctatgactttgccctgtcgcgg
cgcggcgcgacctcgtcgcggctggccgatctgacctgcgtggtcttcgataccgagacg
accgggcttgaccccgtcgccgaccgcatcgtgcagatcgccggtctgcgcatcgcccgc
ggccgcctgaccggcgagcgtttcgacacgctggtcgatcccggccggccgatcccgccc
gcctcgaccgccgtgcatggcatcacggatgcgatggtggccggtgcgcccgacatgacc
gcagcgctgaccgcctttcaccatttcgccgaggatacggtgctggtcgcccataacgcg
cccttcgatatgggcttcctgcgccgcgccgtgcctgagaccggggcgcatttcgacaac
caggtgctggatacggtgctgctttcggcgatgctctggggccagtcggcgccgcattcg
ctggatgcgctgaccgagcggctcggcatcgtcatcccgcccgaggcgcgccacaccgcc
atgggcgacgcccgcgccacggccgaagcctatctgcggctgatcgcggcgctggaggcc
aagggcctggatcggttcgaggacgtgctggccgaggctcgccgccaccgccgcctggtc
gatgatgcgaacaagccggcgggcgatgccgcctccggctcgggtccgtcagcaggctga

DBGET integrated database retrieval system