Paracoccus denitrificans: Pden_4961
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Entry
Pden_4961 CDS
T00440
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pde
Paracoccus denitrificans
Pathway
pde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pden_4961
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pde02000
]
Pden_4961
Transporters [BR:
pde02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pden_4961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABL73021
UniProt:
A1BBX7
LinkDB
All DBs
Position
p1:complement(468219..469832)
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AA seq
537 aa
AA seq
DB search
MNDREITNWTRADDAMVENAIRRGANRRELLRMFMAGGISLAVGGTVLGRATAALAQTPV
SGGHLKAAGWSASTADTLDPAKASLSTDYTRCCAYYNRLTFMKEDGSIEMELADSIESGD
AAVWTVKLKSGVTFHDGKTLEAEDVVFSLQRHLDPAVGSKVNSIAKQFKEIKALDPQTVQ
ITLESPNADLPTILAMHHFMIIANGTTDFSTANGTGAFVSEVFEPGVRSIGKRNENYFKP
QKAHLDSFEYFAIPDDSARVNALLSGDIQFAASIKPQSVRLVESQPDFVLSITTGGNYTN
LNARMDLAPGDKAGFVEGMKYLMNRELIQKSALRGLAEIANDQPVPPMSPFHNAELKPRE
FDPERAKSLFEKAGLLGQPIPVVASEAAASSLDMAMIFQQAGAEIGMRFDIQRVPSDGYW
SNYWLKAPVHFGNINPRPTPDILFSLLYASDAPWNESQYKSEKFDRMLVEARGELDTARR
KEIYDEMQVMVSNEAGTGIPVYISNVDAHAGKVKGLLPNPLGGQMGYAMAEYLWLEA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacagggaaatcaccaactggacccgcgccgacgacgcgatggtcgagaacgcg
atccgccgcggcgccaaccgccgcgaattgctgcgcatgttcatggcgggcggcatctcg
ctggccgtgggcggcaccgtcctgggacgcgcgacggccgcgctggcgcagacgccggtt
tcgggcgggcatctgaaggcggcgggctggtcggcatcgaccgccgacacgctggacccg
gccaaggcctcgctttcgacggattacacgcgctgctgcgcctattacaaccggctgacc
ttcatgaaggaggacggctcgatcgagatggaactggccgacagcatcgaaagcggggat
gcggccgtatggaccgtcaagctgaaatccggcgtgaccttccacgacggcaagacgctg
gaggccgaggacgtggtgttctcgcttcagcgccatctcgacccggcggtgggctccaag
gtcaactcgatcgccaagcagttcaaggagatcaaggcgctggacccgcagacggtgcag
atcacgcttgaatcgccgaatgccgacctgccgaccatcctggcgatgcatcacttcatg
atcatcgcgaacggcaccaccgatttctcgaccgcgaacggcaccggcgccttcgtctcg
gaagtgttcgagccgggcgtccgctcgatcggcaagcgcaacgagaactatttcaagccg
caaaaggcgcatctggacagcttcgaatatttcgccattcccgacgacagcgcgcgggtg
aacgcgctgctgtccggcgacatccagttcgcggcctcgatcaagccgcaatcggtgcgg
ctggtggaaagccagcccgatttcgtgctgtccatcaccacgggcggcaactacaccaac
ctgaacgcgcggatggatctggcgccgggcgacaaggccggcttcgtggaaggcatgaaa
tacctgatgaaccgcgagctgatccagaaatcggcgctgcgcggcctggccgagatcgcc
aacgaccagcccgtcccgccgatgagcccgttccacaacgccgagctgaaaccgcgcgaa
ttcgaccccgagcgcgcgaaatcgctgttcgaaaaggcgggcctgctgggccagccgatc
ccggtggtggcgtccgaggcggcggcctcgtcgctggacatggcgatgatcttccagcag
gcgggcgccgagatcggcatgcgcttcgacatccagcgggtgccgtcggacggctactgg
tcgaactactggctgaaggcgccggtgcatttcggcaatatcaacccgcgcccgacgccg
gacatcctgttctcgctgctttacgcctcggacgcgccctggaacgaaagccagtacaaa
tccgagaaattcgaccgtatgctggtcgaggcgcggggtgagctggacaccgccaggcgc
aaggagatctacgacgagatgcaggtcatggtctcgaacgaggcggggaccggcattccg
gtctatatctcgaacgtcgatgcccatgcgggcaaggtcaagggcctgctgcccaacccg
ctgggcgggcagatgggctatgccatggccgagtatctgtggctggaagcctga
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