Peteryoungia desertarenae: FE840_001755
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Entry
FE840_001755 CDS
T07298
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pdes
Peteryoungia desertarenae
Brite
KEGG Orthology (KO) [BR:
pdes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdes03021
]
FE840_001755
Transcription machinery [BR:
pdes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FE840_001755
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DUF134
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
QLF68376
LinkDB
All DBs
Position
complement(365584..366150)
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AA seq
188 aa
AA seq
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MSDEALSNERAFKRDLLAALPNLRAFAVSLSGRHHVADDLVQDTIMKAWAKQDHFEPGTN
MKAWLFTILRNEFYSQMRKRGREVSDTDGIFTSQLSTHPQQYGSLDLEDFKRALDKLPSD
QREAIILVGASGFAYEEAAEICGCAVGTIKSRINRARNKLQELLGVTGEADYGPDAHSSA
VIKKAFAV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgaggcattgtcaaatgaacgcgccttcaagcgcgaccttcttgctgcgttg
ccgaacctgcgcgctttcgctgtttcactttccggtcggcatcatgtggcagacgacctc
gtgcaggacacgatcatgaaggcttgggcaaagcaggatcattttgaacctgggaccaac
atgaaagcctggttgtttactatcttgcgcaacgaattctattcgcagatgcgcaagcgt
ggacgagaggtctctgacaccgacggtatctttacctctcagctttccacgcatccccag
caatatggttcgcttgatctcgaagatttcaagcgggcactcgacaagctcccgagtgat
cagcgcgaagccattattctcgtgggcgcctcaggctttgcctatgaagaggcggctgag
atttgcggctgtgcggtaggcacgatcaagagtcgcatcaatcgtgcccgcaacaagctg
caggaactgctgggagttaccggagaggcggactatggccccgatgcccacagctctgcc
gtcataaagaaggcatttgcggtctag
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