Clostridioides difficile 630Derm: CD630DERM_24980
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Entry
CD630DERM_24980 CDS
T03785
Symbol
dacF1
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase (putativesporulation-specific penicillin-binding protein)
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf00550
Peptidoglycan biosynthesis
pdf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CD630DERM_24980 (dacF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdf01002
]
CD630DERM_24980 (dacF1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdf01011
]
CD630DERM_24980 (dacF1)
Enzymes [BR:
pdf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CD630DERM_24980 (dacF1)
Peptidases and inhibitors [BR:
pdf01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CD630DERM_24980 (dacF1)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CD630DERM_24980 (dacF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
FeoB_associated
TMEM154
DUF6773
Motif
Other DBs
NCBI-ProteinID:
CEJ99119
LinkDB
All DBs
Position
1:2840008..2841297
Genome browser
AA seq
429 aa
AA seq
DB search
MKRNLSLLLICLLIFTSFLGSSNISFADNEPAIVAKHAVLMDYESGKILYNKDGNSKLYP
ASTTKVWTACLVLKEVKDLNQVIEIKDLPQIDGSSMYLKNGESFTVKQLLDALLVHSAND
AAFVLARYVGGGNVQKFIDLMNSEAKKIGATNTHFNNPHGLPDPNHYTTAHDMALIAREA
MNNDTFRQIVKTKSLKFEATKAYPYERYFVNTNKFLTSHDKITYKGQPINIKYDIVDGIK
TGYTDAAGKCLLSSAVKDGRRVIVAVFNSTNADLYLDSRILIDYGFDNFKCATIVDKEKY
TDTKKVLFTKQHELIYEPKNSYRIFLEKDESQGNYDTKTELNKIDLPIKKGAKVGTLNVY
NNGKLENSIDLIAKNNLDSSLPFLTENNVLMTFVKIIAGILVLLVLFIIASNIKKKKRKK
ARSKKNMKK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatttatcacttttattaatctgtttattgatatttacttcatttttagga
agctctaatatctcttttgcagataatgaaccagctatagttgctaaacatgcagtttta
atggactatgagtctggcaaaatactatataataaggatggaaattctaagctttatcca
gcttcaacaactaaagtatggacagcttgtttagttctaaaggaggttaaagatttaaat
caagtaatagaaattaaagatttacctcaaatagatggctctagtatgtatctaaaaaat
ggggaatcttttactgtaaagcagttactagatgctcttttggttcattctgctaatgat
gctgcttttgtattagctagatatgttggtggtggcaatgtacaaaaatttattgaccta
atgaactctgaggcaaaaaaaattggagctactaatactcattttaataatcctcatgga
ttaccagacccaaatcactacacaacagctcatgatatggctctcatagctagagaagct
atgaataatgatacttttagacaaattgtaaaaactaagtcacttaaatttgaagctaca
aaagcatatccttatgagagatactttgtaaacactaataagtttttgacatcacatgat
aagattacatacaaaggtcaacctataaatataaaatatgatatagttgatggtataaaa
actggatatactgatgctgctggtaaatgtcttttatcgagtgctgtaaaagatggcaga
agagttatcgttgctgtatttaattcaactaatgctgatttatatttagactcacgtatt
ctgattgattatggatttgataactttaagtgtgctactattgttgataaagaaaaatac
acagatactaaaaaagtattgtttacaaaacaacatgaattgatttatgaaccaaaaaat
agttataggatattcttagaaaaagatgaatctcaaggcaattatgataccaaaacagag
ttaaataaaattgatttgcctataaaaaaaggagctaaggttggtactttaaatgtatat
aataatggtaaactagaaaacagtatagacttaattgcaaaaaataatcttgatagcagt
cttccatttttgactgaaaataatgttttaatgacttttgttaagattattgcaggtatt
ctagtgcttttagttttatttataatagcttcaaatataaagaagaaaaaaagaaaaaaa
gctagaagtaaaaaaaatatgaaaaagtaa
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