Planococcus donghaensis: BCM40_00080
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Entry
BCM40_00080 CDS
T04451
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdg03032
]
BCM40_00080
03400 DNA repair and recombination proteins [BR:
pdg03400
]
BCM40_00080
Enzymes [BR:
pdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BCM40_00080
DNA replication proteins [BR:
pdg03032
]
Prokaryotic type
DNA Topoisomerases
BCM40_00080
DNA repair and recombination proteins [BR:
pdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BCM40_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ANU21821
UniProt:
A0A1C7EDQ1
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All DBs
Position
4184..6112
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AA seq
642 aa
AA seq
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MAMEEKGLQGSYEASQIQVLEGLEAVRKRPGMYIGSTGARGLHHLVWEIVDNSIDEALAG
HCTEIRVSIEPDNWIRVEDNGRGIPVGMQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGG
LHGVGASVVNALSETTEVYVNRDEKRHYIKFERGAVTEELKVIGDSDHTGTTIRFKADAE
IFKETTVYEFDILDHRLRELAYLNRGLKIVVKDEREGEEKEKVYHFEGGIKSYVEHLNKS
KDPLHEEAIFVEAERDGITVEVAMQYNAGYAANIFSFANNINTHEGGTHESGFKTALTRV
VNDYGRKKGMLKEQDLNLTGDDVREGLTAIISVKHPDPQFEGQTKTKLGNTEVSTIVNNL
FSNGFERFLLENPAVSKKIVEKGIMASHARMAAKKAREFTRRKSVLEVSSLPGKLADCSS
RDPKISEIYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILTNDEIRNIIT
ALGTGIGEEFNLEKARYHKIVIMTDADVDGAHIRTLLLTFLFRYMRPLLEAGYIYIAQPP
LFQIKQGKHVEYVYTDAQLKTALENLSPTPKPNIQRYKGLGEMNATQLWDTTMDPDVRTL
LQVTLNDAMVADETFHILMGDEVEPRRNFIEENAKYVKNLDV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaagaaaaaggtctacaaggatcatatgaagcgagtcagattcaagtacta
gaaggattagaagcggttcgtaaaagaccaggtatgtatataggatctacaggtgcaaga
gggctacaccatttagtttgggaaattgttgataatagtatcgatgaagcattggctggt
cattgtacagagattcgtgtatcgatcgaaccggacaattggattcgtgtagaagataat
ggacgcggaattcctgttgggatgcaagagaaaatggggcgtccagcagtagaagttatt
atgaccgtccttcatgcaggcggtaaatttggtggcggcggttacaaagtatccggtggt
ctccacggcgtaggcgcttctgtagtaaacgctttgtctgaaacaactgaagtatatgta
aatcgcgatgaaaaaagacattatattaaatttgagcgtggagcggtcaccgaagaactg
aaagtgattggagattcagatcacacagggacgacaatccgttttaaagcagatgcagaa
atcttcaaagaaactacggtttatgaatttgatattttagaccatcgcttgcgtgaactt
gcttacttaaaccgtggcttgaaaattgttgtaaaagacgagcgcgaaggcgaagaaaaa
gaaaaagtctaccatttcgaaggcggcataaagtcgtacgtcgaacatttaaataaatca
aaagatcctcttcatgaagaagctatttttgttgaagcggaaagagatggcattaccgtt
gaagttgcgatgcaatacaatgcgggctatgcagccaatattttctcttttgccaataac
attaatacgcacgaaggcggaacacatgaatctggatttaaaacggctttgacacgcgtg
gtcaatgattatggccgtaaaaaaggcatgttaaaagaacaagatcttaatttgactgga
gacgacgtgcgtgaagggttaacagccattatttcggttaaacatccagacccacaattt
gaaggtcaaacaaaaaccaaattgggcaatacggaagttagcaccatcgtcaataatttg
ttctcaaacggatttgaacgattcttattagagaatcctgctgtttcgaagaagattgtt
gaaaaagggattatggcttctcatgcacgaatggccgctaaaaaagcgcgtgaattcaca
cgccgtaaatcggtgctagaagtatcgagtcttccagggaaacttgctgattgttcatcg
cgtgatccaaaaatcagtgaaatttacatcgttgagggtgactcggctggtggatcggct
aaatcaggccgtgatcgtcatttccaagcaattttaccgttgcgcggaaaaattttaaac
gttgaaaaagcacgactggaccgtattctaactaacgatgaaattcgcaatatcattacc
gcattaggtactggaatcggcgaagaattcaaccttgaaaaagctcgttaccacaaaatt
gttattatgacagatgccgatgttgatggagcgcacattcgtacattgttgttaacattc
cttttccgttatatgcgtccattgcttgaagctggttatatttatattgctcagccccca
ttgttccaaatcaaacaagggaagcatgtggaatatgtctacacagacgcccagctaaaa
acggcactagaaaacttatctccaacgccaaaaccaaatattcagcgctataaagggtta
ggagaaatgaatgcaacacaattatgggacacaacaatggatccagatgttcgtacgttg
ttgcaagtcacattaaacgatgcgatggtcgcagacgaaactttccatattttaatgggg
gacgaagttgaaccacgccgtaattttatcgaagaaaatgcgaaatacgttaaaaacttg
gacgtttaa
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