KEGG   Paenibacillus donghaensis: B9T62_38395Help
Entry
B9T62_38395       CDS       T04971                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pdh  Paenibacillus donghaensis
Pathway
pdh03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pdh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    B9T62_38395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdh03400]
    B9T62_38395
Enzymes [BR:pdh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     B9T62_38395
DNA repair and recombination proteins [BR:pdh03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     B9T62_38395
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: ASA26647
UniProt: A0A2Z2KKT1
LinkDB All DBs
Position
complement(8494991..8495938)
Genome map
AA seq 315 aa AA seqDB search
MKLQPITPFEPILAARLPEGNQWIAQIKWDGVRMLSYCDGDSTELINRRGNRRTSQYPEL
AVQSSYFRAGSAILDGEIIALKEGKPSFHEVMRRDSLRSSSAIEAVIPQVPVIYMIFDLL
YCDGEWLTGLPLSQRQQQLNERLLPHPHVQGVPSYTDPAQLYAAAVKAKLEGIVIKDIGS
TYALGGKDKRWQKCKLISDLTAVAGGVTFRDGIVNALLLGLYGGDGQLHYIGHAGSGRLT
AADWRELTAQVLQLAEDQMPFATIPQRAKGAFWVKPLLVFKIHYLEWNASGTLRQPVIQA
RVDLPPSSCRLEQRS
NT seq 948 nt NT seq  +upstreamnt  +downstreamnt
atgaagctgcagccgatcacgcctttcgagcctatattggcggcacggctgccggaaggc
aaccagtggattgcccagatcaagtgggacggcgtccgcatgctgtcctactgtgacggc
gattccacagaactgatcaaccggcgcggcaaccgccgcacctcacagtatccggagctt
gctgtgcagtccagctacttccgggctggctccgccatcctggacggggagatcattgcc
ttgaaggagggcaagccctccttccatgaggtgatgcggcgcgacagcctgaggagcagc
agcgccatcgaagcggtgattccgcaagttccggtaatctacatgatatttgacttgctc
tattgtgatggagagtggctgacgggtctgccgttatcgcagcggcagcagcagctgaac
gaacggctgctgcctcatccccatgttcagggtgtgccgagctacactgaccctgcccag
ttgtacgccgctgccgtcaaagcgaagctggaaggaatcgtaatcaaggatatcggcagt
acctatgcgcttggcggcaaagacaagcgctggcagaagtgcaagctgatctctgacctt
accgccgttgccggaggcgtcaccttccgggacggaattgtaaatgcgctgctgctgggc
ctgtacggcggggacgggcagctgcattacatcggccatgccggctccggtagactgacg
gcagcggactggagagaactgactgcacaggtgctgcagcttgcagaagaccaaatgccc
tttgccaccataccgcagcgggccaagggagccttctgggtgaagccgctgctagtgttc
aagattcattacctggaatggaatgcctccggtacgctgcgccagccggtcattcaagcg
agggtcgatctccctccgtcgtcttgccgcttggagcagaggagctag

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