Parabacteroides distasonis: BDI_1778
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Entry
BDI_1778 CDS
T00549
Name
(GenBank) putative DNA polymerase III, delta subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pdi
Parabacteroides distasonis
Pathway
pdi03030
DNA replication
pdi03430
Mismatch repair
pdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BDI_1778
03430 Mismatch repair
BDI_1778
03440 Homologous recombination
BDI_1778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdi03032
]
BDI_1778
03400 DNA repair and recombination proteins [BR:
pdi03400
]
BDI_1778
Enzymes [BR:
pdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BDI_1778
DNA replication proteins [BR:
pdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BDI_1778
DNA repair and recombination proteins [BR:
pdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BDI_1778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ABR43523
UniProt:
A6LCV9
LinkDB
All DBs
Position
2118544..2119668
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AA seq
374 aa
AA seq
DB search
MYFKDIIGQEEVKERLRQSTRTGIVPHAQLFTEQGGAGAFPLALAYARYLNCTNRTETDA
CGRCPSCLKYDELAHPDLHFVFPIVAKKEKKKEVCDDYLSEWRGFLKEHPYFNMDEWLDY
IEAGNSQAIIYSKESDEIIHKLSLKIYEAEYRILMVWLPEKLHPTCANKLLKIIEEPPMK
TVILMVSETPDLILGTIQSRAQRIHIRPIETDAIMNAMVSRFGLSPDDAKHVAHLSSGSF
IKAMEAISLGEENKFFLEQFKAMMRNSWARNVKGMKAMADVMAGIGRERQKNFLSYCQHL
IRENFMYRFQSPELNYMNLDEASFSVKFSPFVNERNVIDLMEELAKAERHITQNVNAKMV
FFDLSLRITVLIKR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtattttaaagatatcatcgggcaagaggaagtaaaggaacggttgaggcaatcgact
cggacagggatcgtaccccatgcgcagttattcacggagcaagggggggccggggcgttt
ccgctggctttggcttacgcccgttatctgaattgtacgaaccggacggagacggacgct
tgcggacgttgcccgtcatgccttaaatatgacgaattggcacatcccgatttgcatttc
gtattcccaatcgtagccaagaaagagaaaaagaaagaggtctgcgatgattatctcagt
gaatggcgtgggttcctcaaagaacatccctatttcaatatggatgaatggctggattat
atcgaggccggaaactcacaagcgatcatctattccaaggaaagcgatgagattatccat
aaactgagcctaaagatttatgaggcggaatatcgtatcctgatggtttggttgccggag
aaactacatcctacttgcgccaacaagcttctgaaaatcatagaggagcctcctatgaaa
acggttatccttatggtatccgagacaccggaccttatcctcgggaccatccaatcccgt
gcgcaacgcatccacatccgtcccattgagaccgatgcgatcatgaatgccatggtatcc
cgtttcgggctttcgcccgacgacgctaaacacgtcgctcacctctcctccggaagtttt
atcaaggcgatggaggcgattagcttgggcgaggaaaataaattctttctggagcaattc
aaggccatgatgcgaaactcatgggcacgaaacgtaaaaggcatgaaagcgatggcggac
gtcatggcagggatcggacgggaacgacaaaaaaacttcctctcctattgtcagcatttg
atccgggagaacttcatgtaccggttccaatcgccggaacttaattatatgaatctggac
gaggctagcttctccgttaagttctcccctttcgtcaacgagcgaaacgtgatcgatttg
atggaagaattggcgaaagcggaacgccatatcacacagaacgtgaatgccaagatggtc
ttttttgatttatccttacgaattaccgtactaatcaaaagataa
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