Pseudoalteromonas donghaensis: D0907_05500
Help
Entry
D0907_05500 CDS
T05890
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
pdj
Pseudoalteromonas donghaensis
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdj03000
]
D0907_05500 (pspF)
Transcription factors [BR:
pdj03000
]
Prokaryotic type
Other transcription factors
Others
D0907_05500 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_2
bpMoxR
AAA
AAA_7
zf-NPL4
Motif
Other DBs
NCBI-ProteinID:
AXV64776
LinkDB
All DBs
Position
complement(1204815..1205888)
Genome browser
AA seq
357 aa
AA seq
DB search
MSQFRQQDNLLGQSDSFLSVLDQVSQLASLDKPVLIIGERGTGKELIAARLHFLSKRWEQ
NYIKLNCAALNENLLESELFGHESGAFTGASKRHEGRFERANSGTLFLDELANTSAMVQE
KLLRVIEYGEFERVGGKQTVKVDTRLVCATNEDLPSLAEQGEFRSDLLDRLAFDVITLPP
LRERQEDIMLLAEQFAINMARDLEWELFSGFTRSATETLQSYDWPGNIRELKNVVERSLY
RHGNEHIPVHQIILDPFASKFRPKQRIKGSSNSAPIAHIEHAVTPPSQAQESVSLSKPEI
QFPCNLKQLSNDFEIDVIKKALEHSQFNQKKTAEQLELTYHQLRGYLKKYNLLDQQQ
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttcgccaacaggataatttactcggccaatctgacagctttttaagcgtg
ctggatcaagtatcacagctggctagtttagataaaccagtgcttattattggtgaacgc
ggtacaggtaaagaactgattgcagcgcgtttacattttttatcgaaacgctgggaacag
aactatatcaagctcaactgtgcggcgcttaacgagaacctactcgaaagtgaattattt
ggccatgaaagcggggcttttaccggagcaagtaaacgccatgaaggtcgctttgaacgc
gccaacagtggcacgctgtttttagatgaattagccaacacctcagcgatggtgcaagaa
aaactgttacgcgttattgaatatggtgagtttgagcgtgtcggcggtaagcaaaccgtt
aaagtagatactcgccttgtgtgcgcaacaaatgaagacctaccaagtcttgcagagcaa
ggtgagtttagaagcgacctacttgatcgtctcgcttttgatgttattaccctgcccccg
cttcgtgaacgccaagaagatattatgttacttgcagaacagtttgcgattaatatggcg
cgtgatcttgagtgggagctatttagtggctttactcgcagcgctaccgaaacactgcag
tcatacgactggccgggtaatattcgtgaattaaaaaatgttgttgaacgaagtttgtat
cgtcacggcaatgaacatattcccgttcaccagattattttagacccatttgccagcaaa
ttcagacctaagcaacgtattaaaggcagtagtaacagtgcaccaattgcacatatagaa
catgcggttacacccccttcacaggcgcaagagtcagtatcactaagcaaacctgaaatt
cagtttccttgtaacttgaaacaactttccaatgactttgaaattgatgtcataaaaaaa
gcattggaacacagtcaatttaatcaaaagaaaactgcagaacagctcgaattaacgtat
catcaattacgtggctatttgaaaaaatacaatttattagaccagcagcaatag
DBGET
integrated database retrieval system
