Pseudomonas aeruginosa DK2: PADK2_12905
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Entry
PADK2_12905 CDS
T02161
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdk
Pseudomonas aeruginosa DK2
Pathway
pdk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PADK2_12905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdk03021
]
PADK2_12905
Transcription machinery [BR:
pdk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PADK2_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_11
HTH_29
HTH_Tnp_ISL3
GerE
HTH_31
HTH_3
DUF6362
Xre-like-HTH
HTH_36
HTH_38
DUF134
Motif
Other DBs
NCBI-ProteinID:
AFM64862
LinkDB
All DBs
Position
2731305..2731823
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AA seq
172 aa
AA seq
DB search
MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQDTFLRILLKRELREIG
MPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAPSPEARELVLELLEEISRMLD
GLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAEALYHCYLLRYGE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccgatccttctcagcgcccaccatcgcgccatgcatgcgctgtacagcgag
caccatggctggttgcagaactggctgcgcggcaagctgggctgcgcggcggacgcggcg
gacctggcccaggacaccttcctgcgcatcctgctcaagcgcgaactgcgcgagatcggc
atgccgcgcgcgttcctgcggaccatcgcccgcggcctggtgatcgaccactggcgtcgc
gaggaactgcagcgcgcctacctcgaaagcatcgcccacctgcccgaggcacaggcgccg
tcgcccgaggcgcgggaactggtgctggaactgctggaggaaatctcgcggatgctcgac
gggctcaagccgaaggtccgcaccgccttcctcctggcccagtgcgaagacctcagccac
cggcagatcgccgaacgcatgggggtttcccagcgtagcgtcgagcgctacgtggccgag
gcgctgtaccactgctacctgctgcgctacggcgaatga
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