Parascardovia denticolens: PSDT_1296
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Entry
PSDT_1296 CDS
T03978
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSDT_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdo03400
]
PSDT_1296
Enzymes [BR:
pdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSDT_1296
DNA repair and recombination proteins [BR:
pdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSDT_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
BAR05815
UniProt:
E6K093
LinkDB
All DBs
Position
complement(1597392..1599650)
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AA seq
752 aa
AA seq
DB search
MVILGEQLALDGLAPRKRKSPARVKEPAERLPVAHVVIDVQAIQLGQTFDYLVEERQSAR
ALPGAQVRVRFAGRLVNGIIWGRSEKSETPASSLRYLERVLGDQIALPEQMRSDIEKIAE
FYGGTRANIIRLALPPRVARVDKEPRPGRRDRRGRNGSADSSAAAAFNQENDRVESSYEA
IDQVNRLWEATTPGQVVWDALPGVTTWADDLVWLIGKSLTAGRPIVAELPDSAHIRLVDQ
RLKKAGLRPYSVRSGRGVWQGDYCVLAGMKTPEERYRSYMAIARGEVTCVIGARTSMYAP
VTGPAVFVCVDDIAYQNADGFMPYPNARDVMLLRARNHKGIAVMLSHARSPQSQAEVEGL
PSAIDCGPVVAVHGLDSVVKKLTPWVRVLNRAALEDLTDPTVGSRVPHTAVRILNNALES
GPVLISIPYDGQSMTLICSSCHRQARCPRCSGPLKQPADSGQAARCLWCGQAATAWVCPH
CKGERMRVIRVGALGTAQELLGLFPHTRIVTSTPHQPRGVVPMIEDRPQVVIATPGAEPE
IVSTPVTRMERQEGQERREGQEGQGQSPHYRAMAIVDTWTSLYSSSMDARLDTLTAWMRS
AALCLPHAQGGQVLLLGECDPAIAQSLMTWNPAFLAAQELGERQETAMPPAVTAAHVWGR
REVVEEVLDGLGLDPLQPGDQPPVLGPIPLPPPATIIDRQLEGSNDRVRAVVRVPVGRTL
RLAQQLHAAAAKHARSRVKGELRFQINPKSLS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggtcattttaggggagcagctggcccttgacgggctggccccgcgcaagcggaaaagc
ccggccagggtgaaagagccggccgagaggcttcccgtcgcccacgtggtcattgacgtc
caagccatccaactggggcagaccttcgattatctggtggaggagaggcagtccgcccgg
gccttgcccggagcccaggtgagggtgaggttcgccggccggctggtcaatgggatcatc
tggggccggtcggagaaaagcgagaccccggcctcttccttgcgttatctggaacgggtc
ttgggggaccagatcgccctgccggagcagatgcggtcggacatcgagaaaatcgcggaa
ttctatggggggacccgggccaacatcatccggctggctctgccccctcgagtcgcccgt
gtggataaagaaccccgacccggtcggcgagaccgccgggggaggaacgggtccgccgac
tcttctgcggccgccgctttcaaccaggaaaacgaccgggtcgaatcatcctatgaggcg
atcgaccaggtgaatcgcctctgggaggccaccacccccggccaggtggtctgggatgct
ttgcccggcgtcaccacttgggcggacgacttggtctggctgatcgggaaaagtctgacg
gccggccgccccatcgtggcggaactgccggactcggcccatatccgcttggtggaccag
cgcctgaagaaggccggtttgcgcccttattccgtccgttccggccggggggtctggcaa
ggggactactgcgtcctggccgggatgaagaccccggaggaaaggtaccgttcctacatg
gccatcgcccgaggggaggtgacctgcgtgatcggggcccggaccagcatgtacgccccg
gtgaccgggccggctgtcttcgtctgcgtggacgacatcgcctaccagaacgccgatggc
ttcatgccttaccccaacgcgcgcgacgtcatgctgctccgggccaggaaccataagggg
atcgccgtcatgctctcccacgcccgcagcccccagagccaggcggaagtcgaaggtctg
ccttccgccatcgattgcgggccggtggtggccgtgcatgggcttgattccgtggtcaaa
aagctgaccccctgggtgagggtcctcaatcgggctgccttggaggacttgaccgacccg
accgtcgggtcccgggttccccatacggccgtcaggatcctgaacaacgccttggaatcg
gggccggtgctcatctccatcccttacgatgggcagtccatgactttgatttgttcctcc
tgccatcggcaagcccgctgcccccgctgctccgggccgctcaagcagcctgcggattca
ggtcaggccgcccggtgtctctggtgcggccaggcggccaccgcctgggtctgccctcat
tgcaagggggagcggatgagggtcatccgggtcggggccttggggaccgcccaagaactc
ctcggcctcttcccccatacgaggatcgtcacttccacccctcaccagccccggggggtc
gtgccgatgatcgaggaccggccgcaagtggtcatcgccactccgggtgcggaaccggaa
atcgtctccacccctgtgacccggatggaaaggcaggaagggcaagaaaggcgagaggga
caggaaggacaggggcagagcccgcattacagggccatggccatcgtcgatacctggacc
agcctctattcctccagcatggacgcccgccttgatactttgaccgcctggatgcggtcc
gccgctctatgcctgccgcacgcgcaaggagggcaggtgcttttgctgggggagtgcgat
ccggccatcgcccagtccctcatgacgtggaatccggccttcctggccgcccaagagctg
ggggagaggcaagagaccgccatgcccccggcggtgactgccgctcatgtgtggggaagg
cgcgaagtggtggaagaagtcctggacgggctgggcctcgatcccctgcagcccggggat
cagcccccggttttggggccgattcccctgcctccgcctgccacgattatcgatcgccag
ctggaaggcagcaatgaccgggtacgagccgtggtccgggtcccggtcgggcggaccctt
cgcctggctcaacagctgcacgcggccgcggccaagcacgcccggtcgcgggtgaaaggg
gagctgcgtttccagatcaaccccaaatccttgagctga
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