Polynucleobacter duraquae: CL55_00011220
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Entry
CL55_00011220 CDS
T04207
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pdq
Polynucleobacter duraquae
Pathway
pdq00020
Citrate cycle (TCA cycle)
pdq00190
Oxidative phosphorylation
pdq00650
Butanoate metabolism
pdq01100
Metabolic pathways
pdq01110
Biosynthesis of secondary metabolites
pdq01120
Microbial metabolism in diverse environments
pdq01200
Carbon metabolism
Module
pdq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pdq_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pdq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CL55_00011220
00650 Butanoate metabolism
CL55_00011220
09102 Energy metabolism
00190 Oxidative phosphorylation
CL55_00011220
Enzymes [BR:
pdq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CL55_00011220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
HI0933_like
FAD_binding_3
GIDA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AKD25455
UniProt:
A0A0E3ZK27
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Position
complement(1087917..1089695)
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AA seq
592 aa
AA seq
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MTAIKKVLPRRRFDAVIIGAGGSGMRASLQLAEAGLNVAVLTKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDVIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKAVQRACAAADRTGHAMLHTLYQRNVRAKTNFFVEWLALDLIRDDAG
DVVGVTALEMETGQVYILETKVVMMATGGAGRIWDASTNAFINTGDGMGLAARAGIPLED
MEFWQFHPTGVAGAGVLLTEGCRGEGGILRNKDGERFMERYAPTYKDLAPRDFVSRCMDQ
EIKEGRGCGPNGDYVVLDLTHIGAETIMKRLPSVYEIGINFANVDVTKEPIPVVPTIHYQ
MGGIPTNINGQVVVPANGKPNEIVNGLYAIGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIVAMDLKKREFKPLPANAGEQTLTRIAALDESTSGEYAQDVANDIRKTMQKYAGVFRN
QELMDEGVRQMAKLTERAKHLWLKDKSEIFNTARIEALEVANLIEAANATMISAAARTES
RGAHSHDDHQHRDDDNWMKHTLWYSEGNRLDYKPVVLKPLTVESFPPKERTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgattaaaaaagtattgccacgccgtcggttcgacgcggtaattatcggtgca
ggtggttcaggtatgcgcgcttctttgcaattagcagaggctggcctgaatgttgcggta
ttaactaaggttttcccaacgcgctcacataccgttgctgcccagggcggtatcggcgcc
tcactcggcaacatgagtgaagataactggcactatcatttttatgacacgatcaaaggt
tccgactggttaggtgaccaagacgtgatcgagtttatgtgccgcgaagctccaaaagtt
gtttatgagcttgagcacttcggtatgccttttgaccgcaatccggatggcaccatttat
cagcgcccatttggtggacacacagcgaactatggcgagaaagccgttcaacgtgcttgc
gctgcagctgaccgtactggtcatgccatgttgcataccttgtaccagcgaaacgttcgt
gcaaaaacaaacttcttcgttgagtggttagctctcgatttgattcgtgatgacgcgggt
gatgtcgttggtgttactgcgctcgaaatggaaacaggccaagtttatattttagaaacc
aaagtagtcatgatggctactggcggtgctggtcgtatttgggatgcatcaacaaacgca
tttattaataccggtgacggtatgggtcttgcagctcgtgcaggtattccattggaagac
atggagttctggcaattccacccaactggcgtagctggtgcaggggtattgttgactgaa
ggttgtcgtggcgaaggcggcatcttgcgcaataaggatggcgagcgcttcatggagcgt
tatgccccaacttataaagacttagcgccacgcgatttcgtatcacgctgcatggatcag
gaaattaaagaagggcgcggttgtggcccgaatggcgattatgttgttctcgacttaacg
cacattggtgctgagaccatcatgaagcgcttaccttcggtttatgaaatcggtatcaac
tttgctaacgttgacgttacgaaagagccaattcctgttgtaccaacgattcactatcag
atgggcggtattcctaccaacattaatggtcaagttgttgtcccagctaacggcaaacct
aatgaaatcgtgaatggtctctatgccattggtgagtgctcttgcgtatctgttcacggt
gcaaaccgtttgggtactaactcattgctcgacttattagtatttggtcgtgcagccggt
aatcatattgttgcgatggatcttaagaagcgcgaattcaaaccattgcctgctaatgct
ggtgagcaaactctaactcgtattgctgctcttgatgaatccacctctggtgagtacgcg
caagatgttgcaaacgatattcgtaagacgatgcaaaaatacgctggcgtgttccgcaat
caagagttgatggacgagggtgttcgtcaaatggcgaagttgacagagcgtgctaaacac
ttgtggttgaaagacaagtctgaaattttcaatacggcgcgtatcgaagctttggaagtt
gctaacctgatcgaggctgctaatgcaaccatgatttcagctgcagcacgaactgaaagt
cgtggtgcgcattctcatgatgatcatcaacatcgtgatgatgacaactggatgaagcac
acactttggtatagcgaaggtaaccgcttggactacaagccggttgtccttaagccattg
actgttgagtctttccctccaaaagaacgtactttctaa
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