Photobacterium damselae subsp. damselae: CAY62_02100
Help
Entry
CAY62_02100 CDS
T04927
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pds
Photobacterium damselae subsp. damselae
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pds03016
]
CAY62_02100
Enzymes [BR:
pds01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CAY62_02100
Transfer RNA biogenesis [BR:
pds03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAY62_02100
Prokaryotic type
CAY62_02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ARR48478
UniProt:
A0A1X9TYU7
LinkDB
All DBs
Position
I:472463..473410
Genome browser
AA seq
315 aa
AA seq
DB search
MARRRKGRPIDGVILVDKPTGISSNDTLQKVKRIFFAQKAGHTGALDPLATGMLPICFGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVETRDVKVDRGQLERCIAKFRGTTDQ
IPSMYSALKYKGRKLYEYAREGVEVPRESRKITVYSVDLLRFDSNEVEMELHVSKGTYIR
TIVDDLGEMLGCGAHVIMLRRIGVSHYPVDRMVTIEQLTLLADQAKEKGIDPHTVLDTLL
LPTDTAVQDLPEVNILPAQAVYALHGNPVRAARIPEEGTLVRITVGEKRDFIGVGTIEKG
MLAPKRVIAEQQAEA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgtcgtaagggccgtccaattgatggtgtgattttggttgataaaccaact
gggatcagttcaaacgatacattacaaaaagtaaaacgtatcttctttgcgcaaaaagcc
ggacatactggagcactcgatcctttggcgacgggcatgctgcctatctgttttggtgaa
gcgaccaagttttctcagtttctattagattctgataagcgctatcgtgttattgcgaaa
ttgggtgagcgtactgatacatctgattctgatggacaagtggtagaaactcgtgatgta
aaagtagaccgaggccaacttgaacgttgtattgcaaaattccgcggtacaacagatcag
atcccatcaatgtactcagcattaaaatacaagggccgtaaactttatgagtatgctcgt
gaaggcgttgaggttcctcgtgaatctcgcaaaattacggtttactctgtagatttactg
cgttttgatagtaatgaagttgaaatggaacttcatgtatcaaaaggtacatacatccgt
acaatcgttgatgatctgggtgaaatgctaggttgtggtgctcatgtgatcatgctacgc
cgtattggtgtttcgcattatccggttgatcgtatggtaactattgagcagcttactctg
ttagctgatcaggcaaaagaaaagggtattgatcctcatactgtgcttgataccttgcta
ttaccaaccgatactgccgtacaagatcttcctgaagtgaatatcttacctgctcaagct
gtttatgctttacatggtaatccggttcgagctgctcgtatccctgaagaaggtacacta
gttcgtattaccgttggtgagaaacgcgattttattggtgtgggtaccattgaaaaaggg
atgctagcaccaaagcgtgttattgccgaacagcaagcagaagcgtaa
DBGET
integrated database retrieval system
