Photobacterium damselae subsp. damselae: CAY62_11265
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Entry
CAY62_11265 CDS
T04927
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pds
Photobacterium damselae subsp. damselae
Pathway
pds03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CAY62_11265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pds03400
]
CAY62_11265
Enzymes [BR:
pds01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CAY62_11265
DNA repair and recombination proteins [BR:
pds03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CAY62_11265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
UvrD-helicase
AAA_11
Viral_helicase1
SH3_13
AAA_22
SLFN-g3_helicase
PhoH
DEAD
nSTAND3
AAA_16
FtsK_SpoIIIE
UvrD_C
AAA_28
ResIII
T2SSE
TrwB_AAD_bind
CbiA
AAA
Terminase_6N
NTPase_1
SRP54
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ARR50061
UniProt:
A0A1X9U2M1
LinkDB
All DBs
Position
I:complement(2425580..2427703)
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AA seq
707 aa
AA seq
DB search
MLNMLDRLTEQGVLRAIDSQFAKFVARSVTNIDTPEVVQLVSLASAWLSSELGRGHVCLP
LTAEDQQCMGMFGLHGELAQQVVQLLPEVLHHPQCWPEVLIQSHAVSDGSQPTPLVLSDG
RLYLNRYWQFEQSVAGRILAMATAKGVDTAAQALSSHHIDQLQQNLDQLFPRVYHYLLSS
LQALRLGETTRVDSEEARRLEVIDKLDIVADKISQLDWKQIDAVLAQAQTISDLQILDTL
VPSSFCLNWQKVAAAVALTRQFAVISGGPGTGKTTTVTKLLAALVMENPQHIPNIMLVAP
TGKAAARLTESITNAVKSLPVTDEIKAHIPTQSSTIHRLLGAIPGRVDFRHHKGNPLHLD
VLVVDEASMVDLPMMARLLEAMPAHAKLILLGDKDQLASVEAGAVLGDICSFSALSYSKQ
QAEVLSQLTGFDLSSNTSKTNVVADCLCMLQKSYRFHALSGIGQLAKAINGGRENKVQAV
WQQGFKDINFYPLSTDSYKSMINQIVMFYRNYLDAIEQSQSPREVLQAFAQVRLLCALRE
GDFGVVGLNQRIEHELGRIGKIKQSDETWYIGRPIMISQNDHGLGLYNGDIGIAMLEPNT
DIAAGSTPRMKVYFEMSDGEVKGFLPSRLPEHETVYAMTIHKSQGSEFADTVMVLPKDYS
PILTRELVYTGVTRAKARLYLYGQQEVMARGIRTKTLRASGLSHLLS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatatgttggatcgtttaactgagcagggtgtgctacgagcgatagattctcaa
tttgccaaatttgtggctcgttcagtgactaatattgatacgccagaggtagtgcaatta
gtctcccttgcttcagcttggctcagtagtgagttggggcgaggtcatgtctgtttgccg
ctaacggcagaagatcagcaatgtatgggaatgtttggtttgcatggcgagttggcgcag
caggtggttcaattattacctgaggtattacatcatcctcaatgttggccagaagtgctg
attcaatcccatgccgtatctgatggtagtcaaccaacgccattagtattaagcgacgga
cgtttgtatcttaatcgctattggcagtttgaacagagtgtcgctgggcgcatcttagcc
atggcaacggctaaaggtgtggatactgcagctcaagcgttatcatcacatcatattgat
caactgcagcagaacttagatcaattgtttcctcgagtttatcattatctacttagcagt
ttacaagcattacgcttgggtgaaacaacaagagtagacagtgaagaagcccgtcgattg
gaagtgatcgataagctcgatattgttgccgataaaatatcacagctagattggaagcag
attgatgccgttttagctcaagcccaaactatctcggatctacagattcttgatacgctt
gtgccatcttcgttttgtttaaactggcaaaaagtagcggctgcggtagcattaacccga
cagtttgcggttatttctggtggcccaggtacaggtaaaacgactacggtaaccaagctg
ttggcggctttggtgatggaaaatccgcagcatattcctaatattatgctggtggctcct
acgggtaaggcggcggctcgtttgaccgagtctattaccaatgcggtgaaatcactgcct
gtgaccgatgagataaaagcgcatattccaacccaatcaagtacgattcatcgcttactt
ggggcgattcctgggcgtgtggattttcgtcatcataaaggtaatccgcttcacttagat
gtgctggtagtagatgaagcctcaatggtagatttacctatgatggctcgattgttagaa
gcgatgccagctcacgctaaattaattttattgggcgataaagatcagctagcgtctgtt
gaagcgggtgctgtactgggggatatctgctctttctcggctctaagttatagcaagcaa
caagctgaggtgttgagtcagttaacgggctttgatctttccagcaataccagcaagacg
aatgtggttgctgattgtctctgtatgctacaaaaaagttatcgtttccatgctttatcg
ggcattggccagttagcaaaagcgatcaatgggggtcgagaaaataaagttcaagcagtg
tggcagcaaggatttaaagatattaatttttatccattatcgactgacagttacaaaagc
atgatcaatcaaattgtgatgttttatcgaaattatctcgatgccatagaacaatcacaa
tcaccacgagaggttttacaagcctttgctcaagttcgcctgctgtgcgcattacgggaa
ggggacttcggtgttgttggcttaaatcaacggattgagcatgaattaggtcgtattggt
aagattaagcaaagtgacgaaacttggtacattggccgacctattatgatcagccaaaat
gatcacggtttaggcttatataacggtgatattggtattgcgatgcttgaaccaaataca
gatattgcagcgggttcaaccccaagaatgaaagtctactttgaaatgtcagatggcgaa
gtaaaaggctttttacctagtcgtttacctgagcatgaaacggtttatgctatgaccatt
cataagtcacaaggctcggagtttgctgatactgtgatggttttaccgaaagattacagt
cctattttaacgcgagaattggtctataccggagtgacccgtgcaaaagcgcgtttatat
ctgtatggccaacaagaggtgatggctcggggtattcgcacgaaaaccttgcgagcaagt
ggcttgagtcatctacttagctaa
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