Prevotella dentalis: Prede_1119
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Entry
Prede_1119 CDS
T02403
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pdt
Prevotella dentalis
Brite
KEGG Orthology (KO) [BR:
pdt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdt02000
]
Prede_1119
Transporters [BR:
pdt02000
]
Other transporters
Pores ion channels [TC:
1
]
Prede_1119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
Big_11
Dioxygenase_C
DUF6520
Motif
Other DBs
NCBI-ProteinID:
AGB28447
UniProt:
F9D2F7
LinkDB
All DBs
Position
1:1402491..1405577
Genome browser
AA seq
1028 aa
AA seq
DB search
MMKQVKITMPRRAVTLACGLALAATAFGQQVVVKGHVVDATGEPVIGATVRIDGQQGGTV
TDIDGNFTLNANSGATVTVDYIGYESYKGTASSNMSITLQEGKEKSLNEVVVIGYGAVKK
SDLTGSVTALKPDSKNKGLVVNAQEMISGKIAGVNVTTEGGAPGSKATIRIRGGASLNAD
SDPLIVIDGIPMDNNGVKGLSNALSIVNPQDIESFNILKDASATAIYGSRGSNGVIIITT
KKGRKGQKVQIGYNGSATVSMKRKTIDVMDGDQYRKFVTNLYKGTSQEQTVQNALGKENT
DWQEEIYRTAITQDHALTLSGSLGTVLPYRVSVGYTGEQGILKTSDFDRYTASVNLNPSL
LNDHLKFNINVKGMYADTKYANTDAISAAVWMDPTKPVRSSDAMYSNFGGYYEWTQPGTP
LGDKNWAYTYNNNATKNPVALLNLKNDRAHSKDLNANLDVDYQIQGFEDLRLHGTVGYDI
AEGKQLTDVDPASPENIYYGSHGWEKILKRNFTASAYAQYYHDFNDPAKNHFDIMLGSEF
QRFWRSQHNNYYGYYGAGYNDASKAGTKYNDKTYDFITHSKLLSFFGRANWTLMDSRYML
TATVRADGSSRFNWLQPYDNKQWGVFPSFAFGWRIKDENKFRDISWLSDLKLRLGYGTTG
QQNLGTDIGDYPYYDTYNLNVNPTSYYDIDGDGSLARPVATNHALTWEKTTTYNIGLDWG
ILNQRISGSIDWYYRKTTDLISTVNVGAGSTFKNTLPKNVGDMTNTGVEAAIHFNPIQTK
DWNWMIDYNFTYNQNNISRLTEAYVKDYFIPVGGISAGTGNNCQAHAVGHPAFSYYVFQQ
AYGADGKPLEGVVVDRNGDGVITEKDKYFYKSPVAPVTMGLSSRLEYKSWDLGFSLRASI
GNYVFNNLEAGSANVGSAAIYRNEFLSNRPISALAAGWTSDETYSVLSDRYVQNGSFLKC
DNITLGYSFNSLFRAGKWAGLNGRIYGAVNNVFTITKYSGIDPEVYGGIDNNVYPRPFSA
MIGLNLNF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcaggtaaagattacaatgcctcgcagagccgtcacattagcatgtggcctt
gctctcgcagccactgcgtttggtcagcaagtggttgtcaaaggacatgtagtggatgct
actggcgagccagtcatcggcgccacggtccgtatagacggacaacagggcgggacggtg
accgacatcgacggtaatttcacactgaacgccaactccggagccacggtaaccgtggac
tatatcgggtacgaaagctacaaaggaacggcttcttccaacatgagcatcacgttgcaa
gagggcaaagagaagtctctcaacgaggtggtagttattggttacggtgccgttaagaag
tcagacctcacgggatcggtgactgccctgaagccggacagcaagaacaagggtctcgtg
gtgaacgcccaggaaatgatttcgggcaagattgccggtgtgaatgtcactacggagggc
ggcgcccccggctccaaggcaaccattcgcatccgtggcggtgcctcgctcaacgccgac
agcgacccgctaatcgttatcgacggcatccccatggacaacaatggcgtgaaaggtttg
tccaatgcgctgtctattgtaaaccctcaggacatcgagagtttcaacattttgaaagac
gcctcggccacggccatctacggaagccgcggttcaaacggtgtcatcatcattaccacc
aagaaaggccgcaagggacagaaggtgcaaatcggctacaacggcagtgccacagtgagc
atgaagcgcaagaccatcgacgtgatggacggcgatcagtaccgcaaattcgtgaccaat
ctgtacaaaggcacctcccaggagcagaccgtacagaacgctttgggcaaggaaaacacc
gactggcaggaggaaatctaccgcacggctatcacgcaagaccatgccttgacgctttcg
ggctcgctcggcacagtgctcccctaccgcgtatcagtgggctatacgggtgagcagggc
atcctgaagacctcagatttcgaccgctacacggcatccgtaaacctgaatcccagtctg
ctcaacgaccacttgaagttcaacatcaacgtgaaaggcatgtatgccgacacgaaatat
gccaacaccgacgccatcagcgcagccgtgtggatggatcccacgaagccggtacggagc
agcgatgccatgtacagcaacttcggcggctactatgagtggacgcagcccggcacgcca
ctgggtgacaagaactgggcctacacctacaacaacaacgccaccaagaatcccgtggca
ctgctcaacctgaaaaacgaccgcgcgcactccaaagacctgaatgccaaccttgacgtg
gactatcagatacagggatttgaagacctgcgtctgcacggaaccgtgggctacgacatt
gccgagggcaagcagctgaccgacgttgatcccgcctcgcctgagaacatctactacggc
agccacggatgggagaagattctgaagcgcaacttcacggccagcgcctatgcgcagtac
taccacgacttcaacgacccggccaaaaaccacttcgacatcatgctgggttcggagttc
cagcgcttctggcgcagccagcacaacaactattatggctattatggcgccggttacaac
gatgcctcgaaggccggcaccaagtacaacgacaagacttacgactttatcacccacagt
aagctgctctctttcttcggtcgtgccaactggactctcatggacagccgctatatgctg
actgcaacggtgcgtgccgacggctcaagtcgcttcaattggctgcagccttacgacaac
aaacagtggggtgtgttcccgtcgttcgccttcggttggcgcatcaaggacgagaataag
ttccgcgacatctcctggttgtccgacctgaagctacgccttggctatggcaccaccgga
cagcagaacctcggaaccgacatcggcgactatccctactacgacacttacaacctgaat
gtgaaccccacctcctattatgacatcgacggtgacggctcgctggcacgcccggtagcc
accaaccacgccctgacctgggagaagaccacgacctacaacatcggtctggactgggga
atcctcaatcagcgcatcagtggcagcatcgactggtactaccgcaagaccacagacctc
atcagtacagtgaatgttggtgcaggctctacctttaaaaacaccctgccaaagaacgtt
ggcgacatgaccaacaccggtgtggaggcagccattcacttcaatcctatccagacgaaa
gactggaactggatgatcgattacaacttcacctacaaccagaacaatatctctcggctg
accgaagcctatgtgaaagactactttatccccgtaggaggcatctcggccggtaccgga
aacaactgccaggcacacgccgtgggccatccggctttctcttattatgtgttccagcag
gcttatggggccgacggcaagcccctggagggtgtggtcgtagaccgcaacggcgacggt
gtgattaccgaaaaggacaagtatttctacaagagtcccgtggctccggtgacgatgggc
ctgagctcgcgcctggaatacaagagctgggacctcggtttctcactccgtgccagcatc
ggcaactatgtgttcaacaacctggaggccggctctgccaacgttggttcggccgccatc
taccgcaacgagttcctgagcaaccgccctatctcggcccttgcagccggttggacatcg
gacgagacctactccgtgctctccgaccgctacgtgcagaacggctctttcctcaagtgt
gacaacatcacgctgggctacagcttcaacagtctcttccgtgccggcaaatgggcaggc
ctgaacggccgcatctacggtgccgtgaacaacgtgttcaccattaccaagtacagcggc
atagaccccgaagtgtatggcggtatcgacaacaacgtctacccgcgccccttctcggcc
atgatcggactgaatcttaacttctaa
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