Pseudonocardia dioxanivorans: Psed_0354
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Entry
Psed_0354 CDS
T01479
Name
(GenBank) Recombination protein recR
KO
K06187
recombination protein RecR
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psed_0354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdx03400
]
Psed_0354
DNA repair and recombination proteins [BR:
pdx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Psed_0354
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Psed_0354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AEA22627
UniProt:
F4CS67
LinkDB
All DBs
Position
399200..399817
Genome browser
AA seq
205 aa
AA seq
DB search
MFEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADVSRLQEVLQRVKQGVRFCEVCS
NVSENERCRFCTDARRDPTVVCVVEEPKDVLAVERTREFKGRYHVLGGALDPLGGIGPDS
LKIRELLARLGGTGPASDETEIAEVIIATDPNTEGEATATYLVRLLRDFPGLTVSRPAAG
LPMGGDLEFADELTLGRALSGRRAL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagggaccggtccaggacctgatcgacgagctgggccggctgccgggcgtcggg
cccaagagtgcgcagcggatcgcgttccacctgctggcggccgacccggccgacgtctcc
cggctgcaggaggtgctccagcgggtcaagcagggtgtgcggttctgcgaggtctgcagc
aacgtctcggagaacgaacgctgccgcttctgcaccgacgcgcggcgggacccgacggtg
gtgtgcgtcgtcgaggagcccaaggacgtcctcgccgtggaacgcacccgcgagttcaag
ggccgctaccacgtcctgggcggggcgctggatccgttggggggcatcggccccgactcg
ctgaagatccgagagctgctcgcccggctcggcgggacgggcccggcgtccgacgagacc
gagatcgccgaggtcatcatcgcgaccgaccccaacaccgagggggaggcgacggccacg
tacctggtccggctgctgcgcgacttccccgggctgacggtgtcgcggcccgcggcgggg
ctgccgatgggcggcgacctggagttcgccgacgagctcacgctcggacgggcgctctcc
ggccgccgcgcactctga
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