Pseudonocardia dioxanivorans: Psed_1096
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Entry
Psed_1096 CDS
T01479
Name
(GenBank) UvrD/REP helicase
Organism
pdx
Pseudonocardia dioxanivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
AAA_19
UvrD_C
AAA_22
UvrD_C_2
AAA_30
AAA_28
NACHT
SLFN-g3_helicase
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEA23347
UniProt:
F4CQU7
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All DBs
Position
1156255..1159575
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AA seq
1106 aa
AA seq
DB search
MPLLVRGSVAPVGVPAWDERAWRVLGHRSGPLRVVGGPGTGKTTVLLAALAERVREGVAP
ENVLLLVGSRRAAADMRERLTPLLHPHGGDPESTTRELLVRTVHSYAFGVLRLHAARHGD
PPPRLLAGAEQDVVVRELLAGEIEGDAPDSGWPDRLRPALGLPGFAAELRELLLRAAERG
LGPEELFALGERHGVDEWRAAGRFFRVYEQVVLLRGAAGRGAPQATAPALDSAELVAAAL
DTLAADPDLRAAEQRRVRHLFVDDAQDLDPQQLELVATLGSTASTTLLAGDADQAVLAFR
GADPQGLRAVEAETVVLDVDHRSRAAVRAATGRLAARLPGAGAGRVRVAAGPEDDEGQVL
VRVFGSVAAEAAWIADRLRCAHLVDGVPWSEMAVLSRSTRRSLPALRRALVAGGVPIVAP
PDELPLARQPAVVPLLMVLRAATRPEELDADAAAALLTSPLGSGDPMRMRRLRRGLLRLR
AAAEPDPPAAHATGGTAALADVGAERVSSDPLLVEALRAAAAGEPDPLAALPPSETAPLR
RVGALLATAAAAARDGASVEEVLWQVWQQTGLADRWSAASGRGGPAGAAADRDLDAVLAL
FDAAARYSDRLPGADVAGFTDYLADQQLPTDSLAPRAPGGDAVALLTAHAARGREWRVVA
VPGVQEGSWPDLRLRGSLLGNERLVDLLAGVAEPDGSVSRVAPLLAEERRLFYVACSRAS
HTLLVSAVQGEDEQPSRFLDELDPLPAGAAETRTVHRPGRSLVLAELVGELRRAVCTPGD
EPAAVARRERAAAQLARLAADGVPGARPDEWYGLAPVSTDAPLRVPGEVVPVSPSDVERI
VACPLRWVLERHGGGDVGALAAVTGSLVHALVQASAAGAQPAELEDALRSAWSHLDAGAP
WFGRRELERVRAMLAAFDDWVRTSRDQGLRLVAVEQPVRLDLPVEGDLPPDGSAQPEVGR
SGGPWLQLRGRVDRLEVDSEGRPVVVDVKTGKTAVSARAAAEHPQLAVYQLAAALGAFGR
LLEKGVTPGGARLVYLADRKASGQAKEPSQPPLDAAELARWRGVVATCAEETSGSAFVAR
VSADCERCPVRTSCPAREAGRPVTAP
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctgctcgtgcgcgggagcgttgcgccggtcggcgtaccggcctgggacgagcgg
gcgtggcgggtgctgggacaccggtcgggaccgctgcgggtcgtcggcggccccggcacg
gggaagacgacggtgctgctcgccgcgctggccgagcgcgtccgggagggtgtcgcgccg
gagaacgtgctcctgctcgtcggcagccgccgtgccgcggccgacatgcgcgaacgcctg
acgccgctgctgcacccccatggcggcgaccccgagtcgacgacgcgtgagctgctcgtc
cgcaccgtgcactcctacgcgttcggggtgcttcggctgcatgcggcgcgccacggcgac
ccgccgccgcggctgctggcgggcgcggagcaggacgtcgtggtccgggagctgctggcc
ggcgagatcgagggcgacgcgcccgactccggctggccggaccggctgcgtcccgcgctc
ggcctgcccgggttcgccgccgagctgcgcgagctgctgctgcgtgccgccgagcgcggc
ctcgggcccgaggagctgttcgcgctgggcgagcggcacggcgtcgacgagtggcgggcc
gcgggccggttcttccgggtgtacgagcaggtcgtgctgctgcgcggcgccgcgggtcgg
ggtgcgccgcaggccacggccccggctctcgactccgcggagctcgtcgccgccgcgctc
gacaccctcgccgcggatcccgacctgcgcgcggccgagcagcgccgggtgcggcacctg
ttcgtcgacgacgcgcaggacctcgatccgcagcaactggagctcgtcgcgacgctgggg
tcgacggcgtcgacaaccctgctcgcgggcgacgccgaccaggccgtcctcgcgttccgc
ggggccgacccgcaggggttgcgcgccgtcgaggccgagaccgtcgtgctcgacgtcgac
catcgcagccgggcggcggtccgggccgccaccgggcggctggccgcgcggctgcccggt
gcgggtgcgggccgggtgcgggtggcggcaggccccgaggacgacgaggggcaggtgctc
gtccgggtgttcggctcggtggccgccgaggccgcgtggatcgccgaccggctgcgctgc
gcgcacctcgtcgacggggtgccgtggtcggagatggcggtgctgtcgcggtcgacgcgg
cggtcgctgcccgcgctgcgccgggcactggtcgcgggcggggtgccgatcgtcgccccg
cccgacgagctgccgctggcccgccagcccgccgtcgtcccgttgctgatggtgctgcgg
gcggccacccggcccgaggagctcgacgccgacgccgcggccgcgctgctcacctcgccg
ctcgggtccggcgacccgatgcggatgcgccgcctgcggcgcggtctgctgcggctgcgg
gcggccgcggagcccgacccgcctgccgcccacgcgacaggcgggaccgcggcactcgcc
gacgtcggtgccgagcgggtcagcagcgacccgctgctcgtcgaggccctgcgcgccgcc
gcggccggcgagcccgatcccctcgccgcgctcccgccgtcggagaccgcgccgctgcgt
cgcgtcggcgcgctgctggccacggcggcggccgcggcccgcgacggggcgagcgtcgag
gaggtgctctggcaggtctggcagcagaccgggctggccgatcgctggtccgcggcgagc
ggtcgtggagggcccgccggcgcggcggccgaccgcgacctcgacgccgtcctcgccctg
ttcgacgcggccgcccgctacagcgaccggctaccgggcgccgacgtcgccgggttcacc
gactacctggccgaccagcagctccccaccgactccctcgcgccgcgggcgccgggcggc
gacgcggtcgcgctgctcaccgcgcacgccgcgcgcggtcgggagtggcgggtcgtcgcg
gtgccgggagtgcaggagggcagctggcccgacctgcggctgcgcggcagcctgctgggc
aacgagcggctcgtcgacctgctcgccggtgtcgccgagcccgacggcagcgtctcccgc
gtcgcgccgctgctggccgaggagcgcaggctgttctacgtggcgtgcagccgggcgtcg
cacacgttgctggtcagtgccgtgcagggggaggacgagcagccgtcccggttcctcgac
gagctcgacccgctgccggcgggggccgccgagacccggaccgtccaccggccggggcgc
tcgctcgtgctggccgagctggtcggcgagctgcgccgggccgtgtgcacgccgggcgac
gagcccgccgccgtcgcccgtcgggagcgggccgccgcgcagctcgcccggctcgccgcc
gacggcgtccccggcgcccgtcccgacgagtggtacggcctggccccggtctcgacggac
gcgccgctgcgggtgccgggcgaggtggtgccggtgtcgccgtcggacgtcgaacgcatc
gtcgcgtgcccgctgcggtgggtcctggaacggcacgggggtggcgacgtcggggcgctc
gccgccgtcaccgggtcgctcgtccacgcgctggtccaggcgagcgcggccggggcgcag
cccgccgagctggaggatgcgctgcgctcggcctggtcgcacctcgacgcgggcgccccg
tggttcggccgtcgggagctggagcgggtccgcgccatgctcgcggcgttcgacgactgg
gtccgcacgagccgcgaccaggggctgcggctcgtcgccgtcgagcagccggtccggctc
gacctgccggtcgagggcgacctgcccccggacggctcggcccagccggaggtcgggagg
tccggtgggccgtggctgcaattgcgcgggcgggtcgaccgtctcgaggtcgactccgag
ggccgcccggtcgtcgtcgacgtgaagacgggcaagaccgccgtcagcgcccgcgcggcc
gccgagcacccgcagctggccgtctaccagctcgcggccgcgctcggggcgttcggccgg
ctgctggagaagggcgtcacccccggcggggcgcggctggtgtacctggccgaccgcaag
gcatcggggcaggccaaggagccgtcgcagcccccgctcgatgcggccgagctcgcccgt
tggcgcggggtcgtcgcgacgtgcgcggaagagacgtccggatccgcgttcgtcgcgcgg
gtgagcgccgactgcgaacgctgtccggtgcggaccagctgccccgcacgcgaggccggg
cggccggtgacggcgccgtga
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