Pseudonocardia dioxanivorans: Psed_1650
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Entry
Psed_1650 CDS
T01479
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdx03021
]
Psed_1650
Transcription machinery [BR:
pdx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Psed_1650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
DUF4440
Motif
Other DBs
NCBI-ProteinID:
AEA23886
UniProt:
F4CY01
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All DBs
Position
complement(1736295..1737221)
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AA seq
308 aa
AA seq
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MSPNALHDDTAGDGLARRFEEHRPRLRAVAYRMLGSVAEADDAVQEAWLRLQRTGSDGID
ELGAWLRTVVSRVCLDMLRSRSSRREEPQGVHVPDPVVGPAEEPGPEQEALLADSVGLAL
LVVLDALDPAERLAFVLHDMFAVPFDEIAALTDRSPAAARQLASRARRRVQGSAPRPDSD
PAARRRIVDAFFAAARDGDVEALVAVLAPDVVLRSDGGTRRPAATVEVRGARTVASRAIM
FSHMGPWTRRVLVNGMPGVVVAPDGVPETIMAFTVSDGLIVAIDALSDPDRVARLVPSLD
TIRSDTDS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgaacgccctgcacgacgacaccgccggcgacggcctcgcccgccggttcgag
gagcaccggcctcggctgcgcgccgtggcctaccggatgctcggctcggtcgccgaggcc
gacgacgccgtgcaggaggcctggctgcgcctgcagcgcaccgggtccgacggcatcgac
gagctgggggcatggctgcggacggtcgtgtcgcgggtgtgcctcgacatgctgcgcagc
cgcagttcgcggcgcgaggaaccgcagggcgtgcacgtccccgacccggtcgtcggaccg
gcggaggagcccggcccggagcaggaggcgctgctggccgactcggtcgggctcgcgctg
ctcgtcgtcctcgacgcgctcgacccggcggagcggctcgcgttcgtgctgcacgacatg
ttcgccgtcccgttcgacgagatcgccgcgctcaccgaccggtcccccgccgccgcgcgt
cagctcgcgagccgcgcccggcgccgggtccagggctccgcgccgcggcccgactccgac
cccgccgcgcggcgacggatcgtcgacgccttcttcgccgcggcccgcgacggcgacgtc
gaggcgttggtggcggtgctcgcgccggacgtcgtgctgcggtccgacggcggcacccgc
cgccccgcggcgacggtcgaggtgcggggcgcccggacggtcgcgtcgcgggcgatcatg
ttctcgcacatgggaccgtggacgcggcgcgtgctggtcaacgggatgccgggcgtcgtc
gtcgccccggacggcgtccccgagacgatcatggcgttcaccgtgtcggacgggctgatc
gtcgcgatcgacgcgctctcggaccccgaccgcgtcgcgcgactcgtaccgtccctggac
acgatccgctcggataccgacagctga
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