Phytobacter diazotrophicus: HHA33_11665
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Entry
HHA33_11665 CDS
T06586
Symbol
rcsA
Name
(GenBank) transcriptional regulator RcsA
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz02020
Two-component system
pdz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HHA33_11665 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HHA33_11665 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdz03000
]
HHA33_11665 (rcsA)
Transcription factors [BR:
pdz03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
HHA33_11665 (rcsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QJF17154
LinkDB
All DBs
Position
complement(2446963..2447586)
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AA seq
207 aa
AA seq
DB search
MSTIIMDLCSYTRLGLTGYLASRGVKKREINDVTTVDELESACVALQPTVVFINEDCFIH
DPVSSQHIKEIITQHPRTLFIVFMAIANIHFDEYLLVRKNLLISSKSIKPESLDDILADY
LSKEKKSIGHINLPTLSLSRTESSMLKMWMSGQDTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTSGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatttatgcagttatacccggttgggactaacggggtatctg
gcaagccggggggtaaagaaacgagaaatcaacgacgtaacaacggttgatgaactcgaa
tcggcatgtgtggcgttacaacccacggtggtgtttattaatgaggactgcttcattcac
gatcctgtaagcagtcagcatataaaagaaatcattactcaacacccccggacgttattt
attgtatttatggcaatagctaatattcacttcgatgaatatttgttagttcgcaagaat
ttattgatcagttccaagtcaataaagcctgagtccctggacgatattttggctgactat
cttagtaaagagaaaaaaagtattgggcacattaatttacccacgctatcactgagccgg
acggaatccagcatgcttaaaatgtggatgtcggggcaggataccatccaaatatccgat
cagatgaatattaaagcgaaaacagtatcatcacataaaggtaatataaaaaggaaaatc
aaaacgcataataagcaagtgatctatcatgtcgtgcgtctgaccgacaatgtgaccagc
ggtatctttgtgaatatgcgataa
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integrated database retrieval system
