KEGG   Phytobacter diazotrophicus: HHA33_23210
Entry
HHA33_23210       CDS       T06586                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pdz  Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:pdz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdz02044]
    HHA33_23210 (tssC)
Secretion system [BR:pdz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HHA33_23210 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QJF19277
LinkDB
Position
complement(4892166..4893704)
AA seq 512 aa
MLMSVQETASPGASTQTVTKENIYQSLFEKIHLTPVTSLKEIGEWQSNEAMAEASTDERV
SAAIQVLLSCVASSGKNIEKLDKSLLDFHISELDRKISAQLDAVMHHPEFKKVESLWRGT
WSMVSGIDFRKNVKVELLDVSKQHLREDFDDAPEIIQSGFYRHTYIEEYDTPGGEPIASV
ISSYEFDNSPQDIALLRNISRVAAASHMPFIGAVGPAFFLKNSMEEVAAIKDIGNYFDRA
EYIKWKAFRDTDDARYIGLTMPNVLGRLPYGPDTVPVRSFNYVEAVKGPDHDKYLWTSAA
FAFATNMAKSFINNGWCVQIRGPQAGGAVTDLPIHLYDLGTGNQVKIPTEVMIPETREFE
FANLGFIPLSYYKNRDYACFFSANSTQKPALYDTADATANSRINARLPYVFLLSRIAHYL
KIIQRENIGTTKDRRLLELELNTWIRNLVTEMTDPGDELQASHPLRDGKVVVEDIEDNPG
FFRIRLYAVPHFQIEGMDINLSLVSQMPKAKT
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgttaatgtctgtacaggaaaccgcttcaccgggcgcatcaacgcaaaccgtcacaaaa
gagaatatctaccagtcgttgtttgaaaaaattcacttaacgcccgtcacatcgttaaaa
gaaattggggaatggcaaagtaatgaagcgatggctgaagccagcaccgatgaacgtgtc
tcagctgctattcaggttctactttcttgcgttgcctcatccggtaaaaatatagagaag
ttggataaatcactgctggattttcatatcagtgagcttgaccgaaaaattagcgcgcag
ctcgatgctgtcatgcatcatcctgaatttaaaaaggttgaatccctgtggcgcgggaca
tggtcgatggttagcggtatcgattttcgtaaaaacgtcaaagttgaattgctggatgtc
agtaaacagcatctgcgcgaagattttgacgatgcgccagaaatcattcagagcgggttt
tatcggcacacctacattgaagaatatgacacgccaggcggcgaacccatcgcgtctgtc
atttcgagctacgagtttgacaatagcccacaagatattgccttactgcgcaatatttcc
cgtgtagccgcggcatctcacatgccgtttatcggggccgtcgggccggcatttttcctc
aaaaactcaatggaagaggttgccgcgattaaggacatcggcaactattttgatcgtgcc
gaatatatcaaatggaaggcattccgcgacactgatgacgcgcgttatatcggcctgacc
atgccgaacgtgctgggtcgtctgccttacgggccagataccgtacctgttcgtagcttt
aactatgttgaggcagtcaaagggccggatcacgataaatatctgtggaccagcgctgca
tttgcgtttgccactaacatggcaaaaagcttcattaacaacggctggtgtgtgcaaatt
cgcgggccacaggctggtggtgccgtcaccgatttaccaatccatctgtatgatttaggc
acgggtaatcaggtcaaaatcccgaccgaagtgatgattccagaaacacgcgagtttgaa
tttgcgaacctgggctttatcccgctttcttactataagaatcgcgattatgcctgtttc
ttctccgcaaactccacccaaaaacctgcgctttacgatactgcggatgccacagccaat
agccgtatcaacgcccgtctgccttatgttttcttgctgtcgcgcattgcccactacctc
aaaattattcagagagaaaatatcggtacaaccaaagatcgtcgtttactggaactggaa
ttaaacacctggatccgcaatctggtaacggaaatgaccgatcctggcgacgagttgcag
gcttcccatccgctgcgtgatggaaaagtggtggtagaggatatcgaagataaccctggt
ttcttccgtatcagactttatgcggtgccgcattttcagattgaagggatggacatcaac
ctgtcgctggtttcccagatgccgaaagcaaaaacctga

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