Pseudoalteromonas espejiana: PESP_a0703
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Entry
PESP_a0703 CDS
T04989
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03410
Base excision repair
pea03430
Mismatch repair
pea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PESP_a0703 (recJ)
03430 Mismatch repair
PESP_a0703 (recJ)
03440 Homologous recombination
PESP_a0703 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a0703 (recJ)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PESP_a0703 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PESP_a0703 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PESP_a0703 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
ASM48922
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All DBs
Position
I:696151..697872
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AA seq
573 aa
AA seq
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MKKLIIARENVDDSYLPSNLHPVIKQIYATRNVQDAHELNNSAATLIDFKLFKDIDKATE
LLINALNAQSRILIVGDFDADGATSTATLMQGLAMFGFNNLDYLVPDRFSLGYGLSPALA
EQIVQINPELVITVDNGISCIAGIDILKAVGIKVLVTDHHLQGEQLPNADAIVNPNRHDC
GFPSKSIAGVGVAFYLLIALRSTLREQGHFETHAMPNLADLLDIVALGTVADVVALDANN
RTLVHQGLARIRSGKTRPGITALIEVANRNAARLSASDFGFSLAPRLNAAGRLDDMSLGI
ACLLSNDINQARRIAGELDSLNHARREIEQGMQAEAQAVLDRLAFNDDNIPDAICLYQED
WHQGVIGILAGRLKEKYHRPTVIFAGGENGEIKGSCRSIEGLHMRDLLERLNTADPHLIS
KFGGHAMAAGLSINEQNFNEFKNAFDTAVSAQLSEESKRCIVFTDGELPNECFTMDFAQL
LKQSGPWGQQFPEPVFEHTFEVIQQRIVGEKHLKLVLKHQSGRLVDAIAFGIDVKAWPDT
EARYAKVAYQLDINEFRGKFSLQLIVRELEKVH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgatcattgcgcgcgaaaacgtagacgactcgtacctgccaagtaattta
caccctgttattaagcaaatttatgcaacgcgtaacgtgcaagatgcgcacgagctaaat
aacagtgcagctacgcttatcgactttaagttgtttaaagacatagataaagccaccgag
ttacttataaacgcgcttaatgcacaaagccgtattttaattgtgggcgactttgacgcc
gatggcgcaaccagtaccgccacgctaatgcaaggtttagcaatgtttgggtttaataac
ttagactacctagtaccagaccgctttagtttaggttatggcttgagccctgcgctggct
gagcaaatagtacaaataaaccctgaactggttataacggtagataacggtatttcgtgt
attgccggtattgatattttaaaagccgtgggtataaaagtgctggtaacagatcatcac
ttacaaggcgagcaactccctaatgccgatgcaattgtaaatcctaaccgccacgattgc
ggctttccgtcaaaatctattgccggtgttggcgttgctttttacttgcttatagcactt
agaagcacactacgtgagcaaggccactttgaaacccacgctatgccaaacttggccgac
ctacttgatatagtcgcccttggcaccgtagccgatgttgttgcgcttgatgcaaacaac
cgcaccttagtacaccaaggtttagcgcgtattcgcagtggtaaaacgcgacctggtata
acggcacttattgaagtggcgaatcgaaatgcagcgcgtttaagcgccagtgattttggt
ttttcgcttgcgccgcgtttaaatgccgcaggccggttagacgatatgagcttaggcata
gcgtgtttactaagtaacgatataaaccaagcaaggcgcattgccggtgaactcgatagc
ttaaaccacgcgaggcgcgaaatagagcagggcatgcaagccgaggcacaagctgtgctt
gataggcttgcctttaacgacgacaacattcccgacgctatttgtttataccaagaggac
tggcatcagggcgttattggcattttggctggccgcttaaaagaaaaataccaccgccca
accgttatttttgctggtggcgaaaacggtgaaataaaaggttcgtgccgctctattgaa
gggctacacatgcgcgacctcctcgaacggttaaacaccgccgaccctcatttaattagt
aaatttggcggccatgccatggcggcaggtttgagcattaacgagcaaaactttaacgag
tttaaaaacgcgtttgatacagccgtaagtgcgcagttaagcgaagaaagtaaacgctgt
attgtatttaccgatggcgagttgccaaacgaatgctttaccatggactttgctcagcta
ttgaagcaatcaggcccatggggacagcaatttccagagccggtatttgagcacaccttt
gaagttattcagcagcgtatagtgggcgaaaaacacctaaaattagtgcttaagcatcaa
tctgggcggttagtcgatgccattgcctttggcattgatgtaaaagcatggcccgacacc
gaagcccgttatgcaaaagtggcgtatcagctcgacataaacgagtttagaggtaagttt
agcctgcaattaatagtaagagagcttgaaaaagtgcattaa
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