Pseudoalteromonas espejiana: PESP_a2511
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Entry
PESP_a2511 CDS
T04989
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PESP_a2511 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a2511 (uvrB)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PESP_a2511 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PESP_a2511 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
Kinesin
UB2H
DUF87
AAA_5
AAA
AAA_30
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ASM50471
LinkDB
All DBs
Position
I:complement(2418956..2420950)
Genome browser
AA seq
664 aa
AA seq
DB search
MSDHFELKSQFKPAGDQPTAIKQLEEGLEAGLAHQTLLGATGTGKTFTMANIISDLNRPT
IIMAHNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLSATKALLERRDTIIVASVSAIYGLGDPDSYMKMMLLLKVGEQVDQRDMLRRLAELQ
YTRNDIDFSRGTYRVRGEVVDIFPAESDTYAVRVEMFDDEIERLSIFDPLTGAVEKHIVR
ATIYPKTHYVTPREKILDAIEKIKAELKDRRAQLLSVNKLVEEQRIAQRTQYDIEMMTEL
GYCSGIENYSRYLSGRTPGDPPPTLLDYLPDDALMIIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRMPSAMDNRPLRFEEFEAIAPQTIYVSATPGDFELERSAGEVAEQVIRPTGLLD
PLIEIRPVGTQVDDLLSEIYKSVEKGERVLVTTLTKRMSEDLTDYLSEHNVKVRYLHSDI
DTVERVEIIRDLRAGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSARSLIQTIG
RAARHLDGRAILYADKVTKSMEKAIGETERRREIQHAFNVEHGIEPQALVKKITDIMDVG
EEAAPQDNLKLVRKESKKILSAKEIATQIKQLESKMHAYASDLEFEKAASVRDEIHELQQ
QLIN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcactttgagctaaaatcacagtttaaacccgcaggcgatcaacccacagcg
attaaacagcttgaagaaggcttagaagcagggcttgcacatcaaaccttattaggggct
acaggtacaggtaaaacctttaccatggccaacattattagtgacttaaaccgccctaca
ataataatggcgcacaataaaaccttagctgcgcagctatacggcgaaatgaaagagttt
tttcctaataacgcggttgagtattttgtatcgtactacgattattaccagccagaagcg
tatgtagttgccagcgatacctttattgaaaaagatgcgtctattaatgagcacatagag
caaatgcgtttaagtgctacaaaggcactgcttgagcgccgtgatactattattgttgca
tcggtttcggctatttatggtttgggcgaccccgattcatacatgaaaatgatgctgctt
ttaaaagtaggggagcaggttgaccaacgcgatatgctgcgtcgcttagcagagctacaa
tatacccgtaatgatattgatttcagccgtggtacataccgagttcgtggtgaagttgtt
gatatatttccggccgagtcagacacctacgcagtacgcgtagaaatgtttgatgacgaa
atagaacgccttagtatttttgacccgcttacaggcgctgttgaaaaacacatagtacgc
gccactatttaccctaaaacgcactacgtaaccccgcgtgaaaaaattcttgatgccata
gaaaaaataaaagcagagctaaaagatcgcagagcacaattactcagtgttaataaatta
gtggaagagcaacgcatagcgcagcgtactcaatacgatatagaaatgatgaccgagctt
ggttattgctcaggcatagaaaactacagccgttatttatcaggccgtacgcctggcgat
ccaccaccaacgctactagattacttgcctgacgatgcattaatgatcattgatgaatca
cacgtaaccgtatcgcaaattggcgccatgtataaaggcgatagaagccgtaaagaaaac
cttgttgaatacggctttagaatgccatcagctatggataatcgcccacttaggtttgaa
gagtttgaagccattgcgccgcaaactatttatgtatcggcaacgcctggcgactttgag
cttgagcgcagcgcaggcgaagtagcagagcaagtaattcgtccaactggtttgttagac
ccgttaatagaaatacgcccagtaggcacacaggttgatgatctcctctcagaaatatac
aaaagtgtagaaaagggcgagcgtgtacttgttacaacgcttaccaaacgtatgtctgag
gatttaaccgactacctaagcgagcacaatgtaaaagtacgttaccttcactcagacata
gacaccgtagagcgagttgaaataatacgcgatttacgtgctggtgtatttgatgtgtta
gtaggcattaacttattacgagaaggcctagatatgccagaagtggcgctagtggccata
ctggatgccgacaaagaaggctttttacgctcagcacgttcacttattcaaaccataggc
cgtgcagcacgtcaccttgatggccgcgccattttatatgccgataaagtaactaagtcg
atggaaaaagccattggcgaaaccgagcgtcgccgcgaaatacaacatgcctttaatgtt
gagcatggtatagagccacaagcgttggttaaaaagatcaccgatattatggatgtgggc
gaagaggccgcaccgcaagataatcttaaacttgtgcgtaaagagtctaaaaaaatactc
agtgcaaaagaaattgctacgcaaattaagcagcttgaaagcaagatgcatgcatatgct
agcgatttagagtttgaaaaagcagcctcggtacgcgacgaaatacacgaactacaacaa
cagttgattaactaa
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