Pectobacterium parmentieri SCC3193: W5S_1928
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Entry
W5S_1928 CDS
T02514
Name
(GenBank) Transport ATP-binding protein CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
W5S_1928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pec02000
]
W5S_1928
Transporters [BR:
pec02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
W5S_1928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_16
NACHT
DUF87
AAA_22
AAA_25
MMR_HSR1
RsgA_GTPase
AAA_29
DUF4293
Rad17
AAA_5
bpMoxR
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AFI90018
UniProt:
A0A0H3I5J5
LinkDB
All DBs
Position
complement(2089303..2091042)
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AA seq
579 aa
AA seq
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MAQIKTMRVLKPFLALYRQHIWRLSLGVVLAIATLLASIGLLALSGWFLAGAALAGIVGL
LTFNYMLPAAGVRGAAIARTAGRYGERVVSHDATFRVLLRLRVFTFSRILPLSPGGLAQF
RQAELLNRLVADVDTLDHLYLRVISPIVSALAVILIVCYGLSFIDAALALTLGAIMLVLL
LCLPMVFYRAGNGIGQDLTALRAQYRLLLTTWLQGQAELTVFGALDRVRQQLALVEINWL
RRQRQQASLTGLSQAVMILCSGLTVTLILWLAADGVGGNTQPGALIALFVFASLAAFEAL
APVTVAFQHMGQVIASAARVDQIIRQPIDVTFPTRGPETSRTALLELSHVNFTYPGQPQP
VLQNITLSIQAGEHLALLGRTGCGKSTLLQLLTRAWDCEYGDITLNGHPLANWREDDLRA
MMSVVPQRVHIFSATLRDNLLLAAPTARDEKLAEVLQQVGLEKLLENEGLNAWLGEGGRQ
LSGGEQRRIALARALLHDAPLVLLDEPTEGLDAETEKRILQLLRQHCANKTLIVITHRLY
GLESMDRICILDDGKVLEQGSHQTLMAQQGRYWQFRQHV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctcagataaaaacgatgcgagtattaaaaccatttctggcactttatcgtcagcac
atttggcgcttaagcttaggcgtggtactggcaatcgccacattgctggccagcatcggc
ctgctcgccctatccggctggtttctcgctggggccgcactggcagggattgtcgggcta
ctcacttttaactacatgctacccgctgcaggcgtgcggggtgccgctatcgcccgtacc
gcagggcgttatggggaaagagtcgtcagccacgatgcgacatttcgtgttctgctacgt
ctgcgcgttttcaccttttctcgcattctgccgctctctccaggcgggctggcacagttt
cgtcaggctgaactgctaaaccgacttgtggcagacgttgatacacttgaccacctctac
cttcgcgttatttcacctattgtcagcgcgttggccgtcattctcatcgtctgttacggt
ctgagcttcattgatgccgcattggctctgacgcttggtgccatcatgctggtgctcttg
ctctgtctgcctatggtgttttatcgcgcgggtaacggcattgggcaggatttgaccgca
ctgcgcgcgcaataccgcctgctgctaaccacctggctgcaaggtcaggcggagttaacc
gtttttggcgcactagatcgcgtccgtcaacagttggcactggtggaaattaactggctg
cgtcgccagcgccagcaggccagccttaccggtctgtctcaggcggtgatgattttatgc
agtggcctaaccgttacgctgattctgtggctcgccgccgatggtgttggcggcaacaca
cagcccggtgcgttaatcgccctgttcgtgttcgcgtcacttgctgccttcgaagcactg
gcaccggtcacagtggccttccagcatatgggacaagtcattgcttccgccgcaagggtc
gatcaaatcattcgtcagcctattgacgtcacgttcccaacgcgtggcccggaaacctct
cgcacagctttacttgaactctcacatgtcaacttcacttatcccggtcagccacagccc
gtgctgcaaaatatcacgctctcgattcaagcaggcgaacatctggcgctgctggggcgc
accggatgcgggaaatcgacgctattacaattgctgactcgggcatgggattgtgaatac
ggagacattacgctcaatggacacccgcttgccaattggcgggaagacgatctccgcgcc
atgatgagcgtcgtaccacagcgtgtgcacattttcagcgcaacgctccgtgataacctg
ttactggcagcaccgactgcacgagatgaaaaactggcagaggtattacaacaggtcgga
ctggaaaagctgctggaaaatgaggggctgaatgcttggctaggagaaggcggtcgtcaa
ctctccggtggtgaacagcgtcgcatcgcgttagcgcgtgcgctattgcatgatgcgcca
ttagttctgttggatgaacccacagaggggctggacgcagaaacagaaaaacgtattctg
cagctactccgccagcactgtgccaataagacgctgatcgttatcacccatcggttatac
ggtttagaatcaatggatcgcatctgtattctggacgatggtaaagtgctcgaacagggc
agccatcagacattgatggcacaacaaggtcgttattggcaattccgccaacacgtttaa
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