Pectobacterium parmentieri SCC3193: W5S_3132
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Entry
W5S_3132 CDS
T02514
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pec
Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pec03016
]
W5S_3132
Enzymes [BR:
pec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
W5S_3132
Transfer RNA biogenesis [BR:
pec03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
W5S_3132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFI91206
UniProt:
A0A0H3I7K3
LinkDB
All DBs
Position
3364940..3366364
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AA seq
474 aa
AA seq
DB search
MTKKLHIKTWGCQMNEYDSSKMADLLGSTHGYELTEIAEEADVLLLNTCSIREKAQEKVF
HQLGRWKALKDLNPNLIIGVGGCVASQEGAHIRERAHYVDVIFGPQTLHRLPEMINHVQG
TRSPIVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPCDD
VLFEIAQLAAQGVREVNLLGQNVNAYRGETYDGEICSFAELLRLVAAIDGIDRVRFTTSH
PIEFTDDIISVYEDTPELVSFLHLPVQSGSDRVLTMMKRRHTALEYKAIIRKLHNARPGI
LISSDFIIGFPGETQADFEQTMKLIADVNFDMSYSFVYSARPGTPAADMVDDVPEEEKKQ
RLYLLQERITQQAMRFSRLMLGTVQRILVEGTSRKSVMELSGRTENNRVVNFEGTPDMIG
KFVDVEIVDVYTNSLRGIVVRTEDQMDLRVHESPSSVIARTRKENEIGVGFYQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaactgcatattaaaacctggggctgtcagatgaatgagtacgactcatca
aagatggctgatttactgggaagtacgcacggctatgagcttactgaaatcgctgaagaa
gccgatgtcctgctgctcaatacctgttcgatccgcgaaaaggcgcaggaaaaggtcttc
catcaacttggtcgctggaaagcgctgaaagatcttaatccgaacctgattattggtgtc
ggaggctgcgttgcctcgcaggaaggcgcgcatattcgtgaacgtgcgcactacgttgac
gttatttttggtccgcaaactttgcaccgcctgccggaaatgattaatcacgttcagggc
acgcgtagccctatcgttgacatcagcttccctgaaatcgaaaaatttgaccgtctgcca
gagccccgcgccgaagggccgacggctttcgtctccatcatggaaggctgcaataaatat
tgcacattctgcgtggtgccttatacccgtggcgaagaagtcagccgcccgtgcgatgac
gtcttgtttgagatcgctcaactggcggcacaaggcgtgcgtgaagttaaccttctggga
cagaacgttaacgcctatcgaggtgaaacctatgacggtgaaatctgctctttcgccgaa
ttgctacgcttggtcgccgccattgacgggattgatcgtgtccgcttcaccaccagccat
ccgattgaattcacagacgatattatcagcgtctatgaagacacgccggaattggtcagc
ttccttcatttgccagtgcaaagcggctctgaccgcgtattgacaatgatgaaacgccgt
cataccgcgctggaatacaaggccatcatccgtaaactgcacaatgcgcgtccgggtatt
ctgatcagttctgactttatcatcggtttccctggtgaaacgcaggctgactttgaacag
accatgaagctgatcgccgatgtgaatttcgatatgagctacagctttgtctattccgcc
cgtccgggaacaccggctgcggatatggtcgatgacgtgccggaggaagagaaaaaacag
cggttgtaccttctgcaagaacgcatcacccagcaggcaatgcggtttagccgcctcatg
ctgggcaccgtccagcgtattctggtggaaggcacctcgcgtaagagcgtgatggaactg
tctggtcgtacagaaaacaaccgcgtcgtcaacttcgagggcacgccggatatgatcggt
aaatttgtcgatgttgaaatcgttgacgtttataccaactcattgcgtggcatcgtggtg
cgtaccgaagatcaaatggatctgcgcgtacatgaatcaccgtcttccgtgattgcgcgt
actcgtaaagagaacgagatcggcgtcggattctaccagccataa
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