KEGG   Pectobacterium parmentieri SCC3193: W5S_4087
Entry
W5S_4087          CDS       T02514                                 
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pec  Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:pec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pec03019]
    W5S_4087
   03009 Ribosome biogenesis [BR:pec03009]
    W5S_4087
Messenger RNA biogenesis [BR:pec03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     W5S_4087
Ribosome biogenesis [BR:pec03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    W5S_4087
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AFI92148
UniProt: A0A0H3I9J8
LinkDB
Position
complement(4419707..4420249)
AA seq 180 aa
MVDENNLIWIDLEMTGLNPDHDRIIEIATLVTDANLNVLAEGPVLAVHQPDSQLALMDDW
NVRTHGSSGLTDRVKASTMDEHAAELETLAFLQKWVPAGKSPICGNSIGQDRRFLFRYMP
ELEAYFHYRYLDVSTLKELARRWKPEIMAGFKKQGTHQAMDDIRESLAELVYYRENFLRL
NT seq 543 nt   +upstreamnt  +downstreamnt
atggtagatgaaaataacctgatctggatcgatcttgagatgaccggcctgaacccggat
cacgatcgcatcattgagatcgcaaccttggttacggatgcaaatttgaacgtgttggct
gaagggccggtactggcggtgcatcagccagatagccaattagcgctgatggatgactgg
aatgtgcgtacgcacggttcgagcggcctaacggaccgcgttaaagccagcaccatggac
gaacatgccgccgagctggaaacgctggcatttttacaaaaatgggtaccggccggtaaa
tcgccgatctgtggtaacagtatcggccaggatcgccgtttcctgttccgctatatgcct
gagttggaagcctacttccactatcgctatctggatgtcagcacgctcaaagagctggcg
cgacgctggaagccggaaatcatggcgggctttaagaagcaaggcacgcatcaggcgatg
gacgatattcgcgaatcactggcagagctggtctattaccgtgagaattttctgcgattg
tag

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