Pseudonocardia sp. EC080619-01: AD017_02315
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Entry
AD017_02315 CDS
T04234
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pecq
Pseudonocardia sp. EC080619-01
Brite
KEGG Orthology (KO) [BR:
pecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pecq03016
]
AD017_02315
Enzymes [BR:
pecq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AD017_02315
Transfer RNA biogenesis [BR:
pecq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AD017_02315
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Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALL80333
UniProt:
A0A0P0S8D2
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All DBs
Position
501562..502821
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AA seq
419 aa
AA seq
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MNQGARTTGGTDFRPPGDPSPDGSPDPVPLLRPADGLPPVTATAEALAGVAEAFAAGTGP
VAVDAERASGFRYSQRAYLVQLRRAGAGSALVDPIPLRGELGPLAAALGGPEWVLHAASQ
DLPCLGELDLRPASLFDTELAGRLAGLPRVGLGPMVENLLGLSLEKGHGAADWSRRPLPE
DWLVYAALDVEVLIELRDVLTGLLDEQGKLEWARQEFEAVRTAPPPAPRAEPWRRTSGIH
KVRRPRPLAAVRELWQARDSLAAERDIAPGRVLPDAAIVDAAVRNPESAQTLAGLPVFRG
RSQRRLAGYWFDALRRAADLPDAELPRGSATTDGPPPVARWADRDPDAAARLTAARAALA
GVSEQHDVPVENLLQPDLLRRLCWTPPSGGDVRGALAAGGARPWQVELLAPLLEPVLGA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ctgaaccagggtgcgcggacgacaggcggtacggacttccggccgcccggcgatccgtcc
ccggacggttcacccgatccggtaccgctgctgcgtccggccgacggtctgccgccggtc
acggcgacggccgaggccctcgcgggggtcgccgaggcgttcgccgcgggcaccggaccg
gtcgcggtggacgccgagcgcgcgtccggcttccgctactcgcagcgcgcctacctggtg
cagctgcgacgggcgggggccggttcggcgctggtggacccgatccccctgcgcggcgag
ctcgggccgctcgccgcggcgctcggcggccccgagtgggtgctgcacgcggcgtcccag
gacctgccgtgcctgggtgagctggacctgcgtccggcctcgctcttcgacaccgagctc
gccgggcgcctggccgggctcccgcgggtcgggctcggcccgatggtggagaacctcctc
ggcctctccctggagaaggggcacggcgccgccgactggtcccggcgtcccctccccgag
gactggctggtctacgccgcgctcgacgtcgaggtcctcatcgagctgcgcgacgtgctg
accgggctgctcgacgagcagggcaagctggagtgggcccgccaggagttcgaggccgtg
cggaccgcgccaccgcccgccccgcgcgccgagccgtggcgccgcacctccggcatccac
aaggtccgcaggccccgcccgctggccgcggtgcgcgagctgtggcaggcccgcgactcg
ctggccgccgagcgcgacatcgccccgggccgggtgctgcccgacgcggccatcgtcgac
gcggccgtccggaacccggagtcggcgcagacgctggccgggctgccggtcttccgcgga
cgctcgcagcgccggctggccggctactggttcgacgcgctccgccgggccgccgacctc
cccgacgccgagttgccgcgcggctcggccaccaccgacgggccccctccggtggcccgc
tgggccgaccgggacccggacgcggccgcgcgcctcaccgccgcacgggcggcgctcgcc
ggggtctccgagcagcacgacgtcccggtggagaacctgttgcagcccgacctgctgcgc
cggctgtgctggaccccgccgtccggcggcgacgtccgcggcgcgctggcggcgggcggt
gcccgaccgtggcaggtcgagctgctcgcccccctgctggagccggtgctgggcgcctga
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