KEGG   Pseudonocardia sp. EC080619-01: AD017_02315
Entry
AD017_02315       CDS       T04234                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pecq  Pseudonocardia sp. EC080619-01
Brite
KEGG Orthology (KO) [BR:pecq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pecq03016]
    AD017_02315
Enzymes [BR:pecq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AD017_02315
Transfer RNA biogenesis [BR:pecq03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AD017_02315
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ALL80333
UniProt: A0A0P0S8D2
LinkDB
Position
501562..502821
AA seq 419 aa
MNQGARTTGGTDFRPPGDPSPDGSPDPVPLLRPADGLPPVTATAEALAGVAEAFAAGTGP
VAVDAERASGFRYSQRAYLVQLRRAGAGSALVDPIPLRGELGPLAAALGGPEWVLHAASQ
DLPCLGELDLRPASLFDTELAGRLAGLPRVGLGPMVENLLGLSLEKGHGAADWSRRPLPE
DWLVYAALDVEVLIELRDVLTGLLDEQGKLEWARQEFEAVRTAPPPAPRAEPWRRTSGIH
KVRRPRPLAAVRELWQARDSLAAERDIAPGRVLPDAAIVDAAVRNPESAQTLAGLPVFRG
RSQRRLAGYWFDALRRAADLPDAELPRGSATTDGPPPVARWADRDPDAAARLTAARAALA
GVSEQHDVPVENLLQPDLLRRLCWTPPSGGDVRGALAAGGARPWQVELLAPLLEPVLGA
NT seq 1260 nt   +upstreamnt  +downstreamnt
ctgaaccagggtgcgcggacgacaggcggtacggacttccggccgcccggcgatccgtcc
ccggacggttcacccgatccggtaccgctgctgcgtccggccgacggtctgccgccggtc
acggcgacggccgaggccctcgcgggggtcgccgaggcgttcgccgcgggcaccggaccg
gtcgcggtggacgccgagcgcgcgtccggcttccgctactcgcagcgcgcctacctggtg
cagctgcgacgggcgggggccggttcggcgctggtggacccgatccccctgcgcggcgag
ctcgggccgctcgccgcggcgctcggcggccccgagtgggtgctgcacgcggcgtcccag
gacctgccgtgcctgggtgagctggacctgcgtccggcctcgctcttcgacaccgagctc
gccgggcgcctggccgggctcccgcgggtcgggctcggcccgatggtggagaacctcctc
ggcctctccctggagaaggggcacggcgccgccgactggtcccggcgtcccctccccgag
gactggctggtctacgccgcgctcgacgtcgaggtcctcatcgagctgcgcgacgtgctg
accgggctgctcgacgagcagggcaagctggagtgggcccgccaggagttcgaggccgtg
cggaccgcgccaccgcccgccccgcgcgccgagccgtggcgccgcacctccggcatccac
aaggtccgcaggccccgcccgctggccgcggtgcgcgagctgtggcaggcccgcgactcg
ctggccgccgagcgcgacatcgccccgggccgggtgctgcccgacgcggccatcgtcgac
gcggccgtccggaacccggagtcggcgcagacgctggccgggctgccggtcttccgcgga
cgctcgcagcgccggctggccggctactggttcgacgcgctccgccgggccgccgacctc
cccgacgccgagttgccgcgcggctcggccaccaccgacgggccccctccggtggcccgc
tgggccgaccgggacccggacgcggccgcgcgcctcaccgccgcacgggcggcgctcgcc
ggggtctccgagcagcacgacgtcccggtggagaacctgttgcagcccgacctgctgcgc
cggctgtgctggaccccgccgtccggcggcgacgtccgcggcgcgctggcggcgggcggt
gcccgaccgtggcaggtcgagctgctcgcccccctgctggagccggtgctgggcgcctga

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