Syntrophotalea acetylenivorans: A7E78_10170
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Entry
A7E78_10170 CDS
T04594
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pef
Syntrophotalea acetylenivorans
Pathway
pef03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7E78_10170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pef03400
]
A7E78_10170
DNA repair and recombination proteins [BR:
pef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7E78_10170
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A7E78_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
UB2H
AAA_30
AAA_16
AAA_22
P-loop_SecA
TrwB_AAD_bind
NYN_YacP
Pyr_redox
DUF87
AAA
Motif
Other DBs
NCBI-ProteinID:
APG28178
UniProt:
A0A1L3GRA2
LinkDB
All DBs
Position
complement(2236604..2238604)
Genome browser
AA seq
666 aa
AA seq
DB search
MAKFDLQSEYQPRGDQPRAIEELSAGIERGDGHQVLLGVTGSGKTFTVANVINQVQRPAL
VLAHNKTLAAQLYGEFKELFPNNAVEYFVSYYDYYQPEAYVASTDTFIEKDSSINEEIDK
LRHSATRSLLSRNDVLIVASVSCIYGLGSPEAYFGMLIRLEEGQELERNDLLRRLVDIQY
SRNDVDFHRGTFRVRGDTVEIFPAYEEDRALRIEFFGDEIEAISEIDPIRGKVTDRLERT
AIFPASHYVATRPTLDRAIKEIQEELRERIVYFRERNMLVEAQRIEQRTLFDIEMMEEMG
YCQGIENYSRFLDGRKVGQPPATLFDYFPDNSLLFIDESHVSVSQVGAMYRGDRSRKENL
VNYGFRLPSALDNRPLKFEEFEAKGIQTVYVSATPADYELTKAEGVVVEQIVRPTGLIDP
PIEVRPASGQVDDLIDEVRTTVERGERILVTTLTKRMAEELTGYLKELGIKVRYLHSDIH
TMERMEIIRDLRKGVFDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTCGR
AARNVDGRVIMYGDKITRSMQACINETERRRVVQLAYNEEHGITPQTVKKSLRTILEDIA
EKDYAELPQVAEEGAEWHTPNELREEIARLKAEMLQAAGDLEFEKAAELRDKMLVLEKQE
LLVRDG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccaaattcgatctccaatccgaatatcaaccccgtggcgaccagccgcgggccatc
gaagagctgtccgccggtatcgagcggggcgacggccatcaggttttgctcggtgtcacc
ggttcgggcaagaccttcaccgtggccaatgtcattaaccaggtgcagcggccggctctg
gttttggcccataacaaaaccctggccgcccagctctacggcgaatttaaagagctgttt
cccaacaacgccgtcgagtattttgtctcctactacgactactatcagcccgaagcctac
gttgccagcaccgatacctttatcgaaaaggattcctccatcaatgaggagatcgacaag
ctgcgccacagcgccacccgcagcctgctgtcccgcaacgatgtcctgatcgtcgcttcc
gtctcctgcatctacggcctcggttcgccggaggcctactttggcatgctgatccgtctc
gaagagggacaggagctggagcgcaacgacctgctgcgccgcttggtagatatccagtac
agccgcaacgacgtcgattttcatcgcggtacctttcgggtgcggggcgatacggtggag
atctttcccgcctacgaggaagaccgggccctgcgcatcgagttcttcggcgacgagatc
gaggccatcagcgagatcgacccgattcgcggcaaggtcaccgaccgcctggagcgcacc
gccatcttccctgccagtcactatgtcgccacccggccgactctggatcgggcgatcaag
gagattcaggaagagctgcgggagcgtatcgtctacttccgcgagcgcaacatgttggtc
gaggcccaacgcatcgagcagcgcaccctgttcgacatcgaaatgatggaagagatgggc
tattgccagggtatcgagaactactcgcgttttctcgacggccgcaaagtcggtcagccg
ccggccaccctcttcgactactttcccgacaactcgttgctgttcatcgatgagagccac
gtttctgtttcccaggttggcgccatgtaccgaggcgaccgttcgcgcaaggaaaacctg
gtcaactacggcttccgcctgcccagcgccctcgacaaccggcctctcaagttcgaggag
ttcgaggccaagggcatccagaccgtctacgtctcggccaccccggccgactacgagctg
accaaggccgagggtgtggtggtcgagcagatcgtccgtcccaccggccttatcgatccg
cccatcgaagtgcgcccggccagcggccaggtcgacgatctgatcgacgaggtgcgcacc
accgtcgagcgcggagagcgcatcctggtcaccaccctcaccaagcgcatggccgaggag
ctcaccggctatctcaaggaactcggcatcaaggtgcgctacctccattccgatattcac
actatggagcggatggagatcattcgcgatctgcgcaagggggtgttcgacgtgctggtc
ggcatcaacctgctgcgcgaggggctcgatatccccgaggtctctctggtgacgatcctc
gacgccgacaaggaaggcttcctgcgctccgagcgttcgctgattcagacctgcggtcgc
gccgcccgaaatgtcgatggccgagtcatcatgtacggcgacaagatcacccgatccatg
caggcctgcatcaacgagaccgagcggcggcgcgttgtccagttagcgtataacgaagag
cacggcatcaccccgcagacggtcaagaagtcactgcgtaccatcctcgaagacattgcc
gaaaaggattacgccgagctaccgcaggtggccgaggaaggcgccgagtggcacacaccc
aacgagttgcgcgaagagatcgcccgcctcaaggccgagatgctgcaggccgccggggat
ctggagtttgaaaaggccgccgaactgcgggacaaaatgctggtgctggaaaagcaggaa
ttactggtacgggatgggtga
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