KEGG   Syntrophotalea acetylenivorans: A7E78_10170
Entry
A7E78_10170       CDS       T04594                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
pef  Syntrophotalea acetylenivorans
Pathway
pef03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A7E78_10170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pef03400]
    A7E78_10170
DNA repair and recombination proteins [BR:pef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A7E78_10170
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A7E78_10170
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR UB2H AAA_30 AAA_16 AAA_22 P-loop_SecA TrwB_AAD_bind NYN_YacP Pyr_redox DUF87 AAA
Other DBs
NCBI-ProteinID: APG28178
UniProt: A0A1L3GRA2
LinkDB
Position
complement(2236604..2238604)
AA seq 666 aa
MAKFDLQSEYQPRGDQPRAIEELSAGIERGDGHQVLLGVTGSGKTFTVANVINQVQRPAL
VLAHNKTLAAQLYGEFKELFPNNAVEYFVSYYDYYQPEAYVASTDTFIEKDSSINEEIDK
LRHSATRSLLSRNDVLIVASVSCIYGLGSPEAYFGMLIRLEEGQELERNDLLRRLVDIQY
SRNDVDFHRGTFRVRGDTVEIFPAYEEDRALRIEFFGDEIEAISEIDPIRGKVTDRLERT
AIFPASHYVATRPTLDRAIKEIQEELRERIVYFRERNMLVEAQRIEQRTLFDIEMMEEMG
YCQGIENYSRFLDGRKVGQPPATLFDYFPDNSLLFIDESHVSVSQVGAMYRGDRSRKENL
VNYGFRLPSALDNRPLKFEEFEAKGIQTVYVSATPADYELTKAEGVVVEQIVRPTGLIDP
PIEVRPASGQVDDLIDEVRTTVERGERILVTTLTKRMAEELTGYLKELGIKVRYLHSDIH
TMERMEIIRDLRKGVFDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTCGR
AARNVDGRVIMYGDKITRSMQACINETERRRVVQLAYNEEHGITPQTVKKSLRTILEDIA
EKDYAELPQVAEEGAEWHTPNELREEIARLKAEMLQAAGDLEFEKAAELRDKMLVLEKQE
LLVRDG
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggccaaattcgatctccaatccgaatatcaaccccgtggcgaccagccgcgggccatc
gaagagctgtccgccggtatcgagcggggcgacggccatcaggttttgctcggtgtcacc
ggttcgggcaagaccttcaccgtggccaatgtcattaaccaggtgcagcggccggctctg
gttttggcccataacaaaaccctggccgcccagctctacggcgaatttaaagagctgttt
cccaacaacgccgtcgagtattttgtctcctactacgactactatcagcccgaagcctac
gttgccagcaccgatacctttatcgaaaaggattcctccatcaatgaggagatcgacaag
ctgcgccacagcgccacccgcagcctgctgtcccgcaacgatgtcctgatcgtcgcttcc
gtctcctgcatctacggcctcggttcgccggaggcctactttggcatgctgatccgtctc
gaagagggacaggagctggagcgcaacgacctgctgcgccgcttggtagatatccagtac
agccgcaacgacgtcgattttcatcgcggtacctttcgggtgcggggcgatacggtggag
atctttcccgcctacgaggaagaccgggccctgcgcatcgagttcttcggcgacgagatc
gaggccatcagcgagatcgacccgattcgcggcaaggtcaccgaccgcctggagcgcacc
gccatcttccctgccagtcactatgtcgccacccggccgactctggatcgggcgatcaag
gagattcaggaagagctgcgggagcgtatcgtctacttccgcgagcgcaacatgttggtc
gaggcccaacgcatcgagcagcgcaccctgttcgacatcgaaatgatggaagagatgggc
tattgccagggtatcgagaactactcgcgttttctcgacggccgcaaagtcggtcagccg
ccggccaccctcttcgactactttcccgacaactcgttgctgttcatcgatgagagccac
gtttctgtttcccaggttggcgccatgtaccgaggcgaccgttcgcgcaaggaaaacctg
gtcaactacggcttccgcctgcccagcgccctcgacaaccggcctctcaagttcgaggag
ttcgaggccaagggcatccagaccgtctacgtctcggccaccccggccgactacgagctg
accaaggccgagggtgtggtggtcgagcagatcgtccgtcccaccggccttatcgatccg
cccatcgaagtgcgcccggccagcggccaggtcgacgatctgatcgacgaggtgcgcacc
accgtcgagcgcggagagcgcatcctggtcaccaccctcaccaagcgcatggccgaggag
ctcaccggctatctcaaggaactcggcatcaaggtgcgctacctccattccgatattcac
actatggagcggatggagatcattcgcgatctgcgcaagggggtgttcgacgtgctggtc
ggcatcaacctgctgcgcgaggggctcgatatccccgaggtctctctggtgacgatcctc
gacgccgacaaggaaggcttcctgcgctccgagcgttcgctgattcagacctgcggtcgc
gccgcccgaaatgtcgatggccgagtcatcatgtacggcgacaagatcacccgatccatg
caggcctgcatcaacgagaccgagcggcggcgcgttgtccagttagcgtataacgaagag
cacggcatcaccccgcagacggtcaagaagtcactgcgtaccatcctcgaagacattgcc
gaaaaggattacgccgagctaccgcaggtggccgaggaaggcgccgagtggcacacaccc
aacgagttgcgcgaagagatcgcccgcctcaaggccgagatgctgcaggccgccggggat
ctggagtttgaaaaggccgccgaactgcgggacaaaatgctggtgctggaaaagcaggaa
ttactggtacgggatgggtga

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