Candidatus Pelagibacter giovannonii: E5R92_00785
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Entry
E5R92_00785 CDS
T06537
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00860
Porphyrin metabolism
peg01100
Metabolic pathways
peg01110
Biosynthesis of secondary metabolites
peg01120
Microbial metabolism in diverse environments
peg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
E5R92_00785 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peg04147
]
E5R92_00785 (hemB)
Enzymes [BR:
peg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
E5R92_00785 (hemB)
Exosome [BR:
peg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
E5R92_00785 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QIZ20328
UniProt:
A0A6H1Q0I7
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All DBs
Position
complement(130368..131357)
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AA seq
329 aa
AA seq
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MITGNYPNLRLRRSRKNDWSRRLIQENNLSSSDFILPIFLIDGKNIKQSIKTMPDVYRYT
INTLGIIVDRAIKNKIPMVALFPYTNKTKKNDIGTEALNEDNLVCRAIQYIKKRYKNEIG
IMCDVALDPYTSHGHDGLIKSGYVLNDETIEVLINQSLLQAEIGCDVLAPSDMMDGRIGK
IRKALDKEGHEMVQILSYAVKYASSFYGPFRDAVGSKGLLKGDKKNYQMDFRNSNEAIRE
VALDIKEGADMVMVKPGMPYLDIIKTLKDKFKIPVLAYQVSGEYSLLSNSIKKGLIDKNS
VLESLISFKRAGANAIVSYYADRINNLIK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattacaggaaattatccaaatttaagacttagacgaagtcgtaaaaatgattggtct
agaaggttaattcaagaaaataacctttcatctagtgattttatattacctatattctta
attgatggaaaaaatataaaacaatccattaaaacaatgcctgatgtttataggtacaca
ataaatacgcttggaattattgtagatagagcaatcaaaaacaaaataccaatggtggca
ttgtttccgtatacaaataagacaaaaaaaaacgatattggtaccgaagcattaaatgag
gataatcttgtttgcagagcaattcaatatatcaaaaaaaggtataaaaatgaaattggt
attatgtgtgatgtagctttagatccttacacttctcatggtcatgatggtttaataaaa
tcaggctatgtcttaaatgatgaaactattgaggtcttgataaatcaatcattgttacaa
gcagagattggttgtgatgttctggctccttcagacatgatggatggtagaataggcaaa
ataagaaaggctttagataaagaaggtcatgaaatggttcaaatactttcttatgcagta
aaatatgcctcaagtttttatggaccatttagagatgctgttggttcaaaaggtttatta
aaaggtgataagaaaaattatcaaatggactttagaaatagcaatgaggcaataagagaa
gtggctttagatattaaagaaggggctgatatggttatggttaaacctggtatgccatat
ttagacataattaaaacacttaaagataaatttaaaattcctgttctcgcttatcaagtc
tcaggcgaatactcactattaagtaatagtattaaaaaaggtctaatagataaaaactca
gtgttagagagtttaatttcttttaaaagagccggagcaaacgctatagtaagctattac
gctgatagaattaacaatttaatcaaataa
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