Planctopirus ephydatiae: Spb1_25920
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Entry
Spb1_25920 CDS
T06220
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh00730
Thiamine metabolism
peh01100
Metabolic pathways
peh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Spb1_25920 (thiC)
Enzymes [BR:
peh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Spb1_25920 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
QDV30658
UniProt:
A0A518GPW0
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All DBs
Position
complement(3240814..3242667)
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AA seq
617 aa
AA seq
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MINIAHSNSMELPPLGNNPSTHRAGTTPGSFANPPRVAPGVEGRWTFSSPDTPNMPQPSE
KTAWDFLPEGWSTVELEEAGELVDYTPGATRVVFLQSDDSPRDVCLPAGFEPSTQLEWAR
VGVITPQMVRVAEREDHLTPAQVRDEIAAGRLVIPANKHHLKYQLDPMAIGRATKTKINA
NMGASPVSSSTDEEVEKLKWAERWGADTVMDLSTGGDLNACRVAIVQNSTVPIGTVPIYS
MIIGRKIEELSHEIILESLEQQAQQGVDYFTIHAGVLREHLPFVVKRLIGIVSRGGSLLA
QWMIRNSGQNPMYDRWEDICDIMRKHDVTFSIGDGLRPGGLADATDRAQLAELATLGELT
ERAWRKGVQVMIEGPGHVPFDQIEYNMKLQRTLCHGAPFYVLGPLVTDIFPGYDHITSCI
GATAAAYHGASMLCYVTPKEHLGLPKKDDVKQGCIAYKIAAHAADVALGIPGTRDRDDEL
TKARAALNWEKHFELSFDPDTARAYHDEDLDVDTDFCAMCGHDWCSVRISKEIVEFASGK
DENYQWNRAKVSAALTPEQQEILEKRGHLSPQEIHQLASKTKKVVGANKDAKAACHSDVV
DAESAKQIQVERLSSAT
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatcgcgcattcgaactcgatggaacttcctcctttaggcaataacccttcc
actcatcgtgccggcacaacgccaggcagctttgccaaccccccacgagttgcacctggt
gtcgaaggtcgctggactttctcctcgcccgatactcccaacatgccgcagccttccgaa
aagacggcttgggatttcctccctgagggttggtcaacagtcgaactcgaagaggcaggc
gaacttgtcgattacaccccgggtgccacccgcgttgtctttctgcagagtgacgacagc
ccgcgtgacgtctgtttgcccgccggcttcgaaccctcgacacagctcgaatgggcgcgt
gtcggcgtgatcaccccgcagatggtgcgagtcgctgaacgtgaagatcatctcacgcct
gcccaggttcgtgacgagatcgccgctggccggttggtgattcccgccaacaagcaccac
ctcaaataccagctcgatcccatggccattggccgggcgacgaagaccaagatcaacgcc
aacatgggggcctcccccgtttcttccagcaccgacgaagaggtcgaaaagctgaagtgg
gccgagcgctggggtgccgatacggtgatggatctttccacgggcggcgacctcaatgcc
tgccgcgtggccatcgtgcagaacagcacggtccccatcgggacagttcccatctattcg
atgatcatcggccgcaagatcgaagagctctcgcacgagatcatccttgaaagtctcgaa
caacaggcacaacaaggggtcgattacttcacgatccatgccggtgtcttgcgtgaacat
cttccttttgtggtcaagcggctcatcgggattgtcagccggggtggttcacttctggct
cagtggatgatccgcaacagcggccagaatccaatgtacgaccgctgggaagacatctgc
gacatcatgcgcaagcacgatgtcaccttctcgatcggcgacggcctgcgtcccggcgga
ttggccgatgccaccgaccgtgctcaactcgccgaactggcgacactcggcgaattgacc
gagcgcgcctggcggaagggtgtgcaagtcatgatcgaagggccgggccacgtccccttc
gaccagatcgaatacaacatgaagctccagcggacgctctgccacggtgccccgttctat
gtcctcgggccgctcgtaaccgacatcttccctggctacgaccacatcaccagttgcatc
ggtgctactgccgctgcctatcacggcgcgagcatgctctgctatgtgacgcccaaggag
cacctgggcctgcccaagaaggacgacgtcaagcagggttgcatcgcctataagattgcg
gcccatgcggccgatgtggccctcggcatccccggcacccgcgatcgcgacgatgaactg
acgaaggcccgtgcggccctcaactgggagaagcacttcgaactcagcttcgaccctgat
acggcgcgtgcctatcacgacgaagacctcgatgtcgatactgacttctgtgcgatgtgc
ggccacgactggtgcagcgtccgcatctcgaaagagatcgtggagtttgcttcaggcaag
gatgagaactaccagtggaaccgcgccaaggtttccgccgctctcacgccggagcagcag
gagatcctcgaaaagcgcggtcacctctccccgcaggagatccatcaactcgccagcaaa
accaaaaaggtcgttggtgcgaataaagatgccaaagccgcctgccacagcgacgtggtt
gatgccgaaagtgccaagcagatccaggtcgagcgactgagttcggcgacctga
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