Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00310
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Entry
SAR11G3_00310 CDS
T01465
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel03030
DNA replication
pel03410
Base excision repair
pel03420
Nucleotide excision repair
pel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAR11G3_00310
03410 Base excision repair
SAR11G3_00310
03420 Nucleotide excision repair
SAR11G3_00310
03440 Homologous recombination
SAR11G3_00310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pel03032
]
SAR11G3_00310
03400 DNA repair and recombination proteins [BR:
pel03400
]
SAR11G3_00310
Enzymes [BR:
pel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAR11G3_00310
DNA replication proteins [BR:
pel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAR11G3_00310
DNA repair and recombination proteins [BR:
pel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SAR11G3_00310
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAR11G3_00310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEA80785
UniProt:
F2I018
LinkDB
All DBs
Position
complement(280765..283584)
Genome browser
AA seq
939 aa
AA seq
DB search
MANNSKKHIYLIDGSGYIFRAYYALPPLTRKSDGLPVGAVSGFCNMLYKFLEESRSLDKV
DRPTHFAVIFDTARKNFRNDIYKEYKANRQDTPEDLIPQFSYIRKAVEAFNILGVELANY
EADDLIATYKEQASKKNIKVTIISSDKDLMQLVDENTFMMDTMKDKYIGKEEVKEKFGVY
PDKVIDVQSLAGDSSDNIPGVPGIGIKTAAELINQFGSLEKVLENASSIKQPKRRQTLLD
NKDKALISKKLVTLKKDVPVKTSLDEFALKSIDPDKILKFLQEMEFGRLFKKLESDYGKF
SGKASPQSKLTESKEPSVESGKLPDVPEKIIEKKFSLIFDMSELKSVLKKSDEKGLFAID
TETNSLDTMVANLVGISLSYRPGEAFYIPIGHQNKSDPSIKKQLKLKDVLSVIKPYLEDP
TVKKVGQNIKYDYRIFLKHGIQMNSIEDTMLMSYSLDAGKNRHGMDLLSELHLNHKTISF
KDVAGIGKSQVTFDFVDIEQAKDYACEDADITLRLYKMFEKRLFNENVLGVYDNLEKPLI
KILSSVENNGIKIDKNILEKLSKKFEIEIQNLEKKIFKIAKEEFNIGSPKQLGDVIYEKL
KIAGSKKTKKGNFATNVAVLEDLASQGHEFPKLVLNWRQKSKLKNTYTDTLPTYINAKSK
RVHTSFLLAATTTGRLASANPNLQNIPIKNIEGKEIRSAFVSDKNSKLISADYSQIEMRI
LAHMGDVKELKKAFLNKEDIHTLTASQIFDVSLKKVDEDMRRKAKAINFGIIYGISSYGL
AKQISVSNSEAENFLKSYFGKFPEIRDFMNENITFCRKNGYVKTLFDRKCHFPNINDKNH
TLRTFQERACINAPIQGTAADLLRLAMIQIDKKISAKEIPASLLIQVHDELLLECKEKDV
SSVQQKIAHEMENASEPLVKFSIPLTVDVKSGKNWSEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggccaataactccaaaaaacatatttatttaattgatggctctggttatatctttagg
gcttattatgcccttccacctttaacaagaaaaagcgatggcttaccagttggtgcagtg
agtggtttttgtaacatgctttataaatttttagaagaatctaggtctttagataaagta
gatcgaccaacacactttgcagttatatttgatactgcaagaaaaaattttagaaacgat
atttacaaagagtataaagccaatagacaagacacacctgaagatcttattccacaattt
agctacataagaaaagccgtagaggcctttaacattttaggagttgaattagcaaattat
gaggcagacgatttgatagccacctataaagaacaggcatcaaaaaagaatataaaagta
acaattatttcatccgataaagatcttatgcagttggttgatgagaatacttttatgatg
gatacaatgaaagataagtacattggcaaagaagaggtcaaagaaaaattcggagtttat
ccagataaagtaattgacgtccagtccttagctggcgattcatcggacaatatacctgga
gtaccaggtattggaattaaaacagcagcggaattgataaatcagtttggttctttggaa
aaagttttagaaaatgcttccagcataaagcagcctaaacgtaggcagactttgctagat
aataaagacaaggctttaataagcaaaaagttagtaactttaaaaaaagatgtgcctgtc
aaaacctctttagacgagtttgcccttaaatccatcgatcctgataaaatattaaagttt
ttgcaggaaatggagtttggtaggctttttaaaaaattagaaagtgattatggaaaattt
tcaggaaaagcatctcctcaatctaaacttacagagtctaaagagccaagtgttgaatct
ggcaaattaccagacgttccagaaaaaattatagaaaaaaaattctccctaatttttgac
atgagtgaattgaagagtgtactaaaaaaatcagatgaaaaaggattgtttgcaattgat
acggaaaccaattcattggacacaatggttgctaacttggttggtatttccttgtcctat
aggcctggagaagcattttatattcctatcggtcatcaaaacaaatctgatccatcaatc
aaaaagcagttaaagctaaaagatgtattgagtgtcattaagccttacttggaggaccca
acagttaaaaaagtgggtcaaaatattaaatatgattatagaatttttctaaaacatggc
attcagatgaactcaatagaagatactatgctgatgtcatattccttagacgcaggaaaa
aatagacatggtatggatcttttgtcagagcttcatttaaatcacaaaactatttcattt
aaagatgttgccggaataggaaaatcccaagtcacttttgattttgtagatatagaacaa
gcaaaagattatgcctgcgaagatgctgatattactcttagactctacaaaatgtttgaa
aaaagactatttaatgaaaatgttcttggcgtctatgacaatttagaaaagccattaatt
aaaatattatcttcagttgaaaacaatggaataaaaatagacaaaaacattttagaaaaa
ttgtctaaaaaatttgaaatagaaattcaaaacctcgaaaaaaaaatatttaaaattgcc
aaggaagaatttaacattggttctcccaagcaattaggagatgttatttatgagaagtta
aaaattgccggaagcaaaaagactaaaaaaggaaattttgctactaatgtggcagtgtta
gaagatctagcatcccaaggacatgaatttcctaaattagttttgaattggagacaaaaa
tctaaacttaaaaatacatacacggatactctaccaacttatattaacgccaaaagtaaa
cgggtgcatacctcctttttattggcagccaccaccacaggtaggcttgctagtgccaat
ccaaatttgcaaaacattcctatcaaaaatatagaaggaaaagaaattagatctgcattt
gtgtctgataaaaactcgaaactaatctcggctgactatagtcaaatagaaatgaggatt
cttgctcatatgggggacgttaaggagttaaaaaaagcctttttaaacaaagaagatatt
catactttaacggcgagccaaatatttgatgtttctttaaaaaaagtagatgaggatatg
agaagaaaagcaaaagcaatcaactttggaattatttatggaatttcttcttatggtttg
gcaaaacaaatatctgttagcaattctgaagcagagaattttttaaaatcctattttgga
aaatttcctgaaataagagattttatgaatgaaaatataacattttgtagaaagaatggt
tacgtaaaaactttatttgatcgaaaatgtcactttcctaacatcaatgataaaaatcat
accctaagaacatttcaagaaagagcttgtattaatgctcccattcaaggtacggcagct
gacttgttaagattagcaatgatccaaatcgacaaaaaaatttctgctaaagagatacca
gcaagcttacttattcaggtgcatgacgagcttttattagagtgtaaggaaaaagatgta
tctagtgttcagcaaaaaatagctcatgagatggaaaatgcctctgagcctttagtcaaa
tttagcattccactcacagtagatgtaaaaagtggtaaaaactggagtgaggctcattaa
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