Candidatus Pelagibacter sp. IMCC9063: SAR11G3_00877
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Entry
SAR11G3_00877 CDS
T01465
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pel
Candidatus Pelagibacter sp. IMCC9063
Pathway
pel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAR11G3_00877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pel03021
]
SAR11G3_00877
03400 DNA repair and recombination proteins [BR:
pel03400
]
SAR11G3_00877
Enzymes [BR:
pel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAR11G3_00877
Transcription machinery [BR:
pel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAR11G3_00877
DNA repair and recombination proteins [BR:
pel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAR11G3_00877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MC1
Motif
Other DBs
NCBI-ProteinID:
AEA81352
UniProt:
F2I0R7
LinkDB
All DBs
Position
780758..781234
Genome browser
AA seq
158 aa
AA seq
DB search
MARVTVEDCLEQVDNQYDLIILAKERTLQIGAGDKPLVDEDNDKKTVISLREIGDKKIDI
KNLNNATVDRARDHPEDATVQEDFDAPEGDEFEAIYKGEVSKSGQAILPSKRSRKVPVAS
AAVADDADEGDDSDNDNVSEDIVDQTTEANPTEDKPSE
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgtaacagtagaagattgtttagagcaagttgataatcagtatgatttgatc
attctagctaaagaaagaactttgcaaattggtgcgggggataagcctttagtagatgaa
gacaatgataaaaaaactgtaatttcactgagagaaattggtgataaaaaaatcgatatt
aaaaatttaaataatgcaacggttgatcgtgctagagatcatccagaggacgcaacagta
caagaagattttgatgctccagaaggagacgagtttgaagcaatttataaaggtgaagta
tctaaatctggacaagcaattttaccatccaaaagatcaagaaaagttcctgtagcttct
gcagccgtagccgatgatgcagatgaaggagatgatagtgacaatgataacgtatctgaa
gatatcgtagatcaaactactgaagcaaatcctactgaagacaaaccttcagaataa
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