Pseudomonas entomophila: PSEEN1722
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Entry
PSEEN1722 CDS
T00362
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN1722 (sbcD)
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSEEN1722 (sbcD)
Archaeal homologous recombinant proteins
PSEEN1722 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CAK14570
UniProt:
Q1ICP3
LinkDB
All DBs
Position
complement(1795773..1797011)
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVHWLDEGQLDT
ERLLIPLTNARGKVGAWCLALPFLRPAEVTGPALGDDYLQGITQVHEQLIAAAQAKRKKD
QALVAISHAHMAGGSISEDSERSLIIGNAEALPARLFDKAISYVALGHLHKPQKVNREER
IRYSGAPIPLSFAEINYPHQVLEVELDGSELVSVEARPVPRAVALRRVGPAPLGELLEQL
ADLPVIDLLEDPNRQPWLEVRVRLDEPQPDLRQQIEGALQGKAVRLVRISAEYAGSGRAE
DDEQAFVELAQMTPQDLFGRAWEQAYGSAADEQALADFAELLQDVLHEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccagagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgcttggccagctgcgcctgcgccagccc
gacgcgctgctgatcgccggcgacatcttcgacaccgtcaacccaccggtcaaagcccag
gaacggctgtacgacttcatcgtccaggcccacgagcaacagcccaagctggatatcgtg
atgatcgccggcaaccacgactccggttcacgcatcgaactgccggcgcccctgatgcgg
cgcctgcgtacccatgccctgggccgggtgcactggctcgacgagggccagctggacacc
gaacggctgctgattccgctgaccaacgcccgcggcaaggtcggcgcctggtgcctggcc
ctgcccttcctgcgccccgccgaagtgaccggccccgcgctgggcgacgattacctgcaa
ggcatcacccaggtgcacgagcaactgatcgccgctgcgcaggcgaaacgcaagaaggat
caggcgctggtcgccatcagccacgcgcacatggccggcggcagcatttcggaggactcc
gagcgcagcctgatcatcggcaacgccgaagcgctgccggcgcgtctgttcgacaaggcc
atcagctatgtcgccctcggccacctgcacaagccgcagaaggtcaaccgcgaggagcgt
atccgctacagcggagcgccgatcccactgtcgttcgccgagatcaactacccgcaccag
gtgctcgaagtggagctggacggcagtgaactggtcagcgtcgaggcgcgcccggtgcca
cgcgccgtggcgctgcgacgggtcggcccggcgccgttgggtgaactgctcgaacaactg
gccgacctgccggtgatcgacctgctcgaagaccccaaccgccagccctggctggaggtg
cgcgtgcgcctggacgagccgcagcccgacctgcgccagcagatcgaaggcgcattgcaa
ggcaaggccgtgcgcctggtgcgcatcagcgccgagtatgccggcagcggccgtgctgaa
gatgacgagcaagccttcgtcgaactggcccagatgaccccgcaggacctgttcggccgc
gcctgggagcaagcctacggcagtgccgccgacgagcaggccctggccgacttcgccgaa
ctgctgcaagacgtcctgcatgaggaggagcagccatga
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