KEGG   Pseudomonas entomophila: PSEEN2767Help
Entry
PSEEN2767         CDS       T00362                                 

Definition
(GenBank) putative DNA ligase, ATP-dependent
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pen  Pseudomonas entomophila
Pathway
pen03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PSEEN2767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pen03400]
    PSEEN2767
Enzymes [BR:pen01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PSEEN2767
DNA repair and recombination proteins [BR:pen03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PSEEN2767
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: CAK15551
UniProt: Q1I9X2
LinkDB All DBs
Position
complement(2904721..2907183)
Genome map
AA seq 820 aa AA seqDB search
MAKPLQEYQRKRDFNATPEPAGKRARPRSAHALQYCIQKHDASHLHYDFRLELDGTLKSW
AIPKGPSLDPKVRRLAVHVEDHPLDYANFEGHIPEGHYGAGDVIVWDRGVWEPEGDPREA
YAKGKLRFRLQGEKLSGVWNLFRTHLAGKKEQWMLVKSHDGQARSETDYSVVEALPDSVL
SERTLPPRRPAKAPAATRKAGRKPLPELLQPQLATLVDSPPSGDWRYEVKFDGYRVLARI
DGDDVRLFTRNGHDWSAKMPRQVKALRALGLDAAWLDGEMVVVGDNGVADFQALQNAFDT
EHDERITYYLFDLPWLGDEDLRELPLQARRATLAKLLEDNASPLLSYSADFTEPVDSLLE
SACRLELEGLIGKRADSPYIGRRSSDWIKLKCKQRQEFVIVGYTDPKGSRHGFGALLLAL
HDHDSGQLRYAGKVGTGFSATTLDSILARLKPLQAAKPPLVSPPTGADVRGVHWLKPHLL
AEVAYAQMTREGIVRHSVFHGLRDDKPATDIDLEQAMPAKRAAQARPEGLPPLRLTHPDR
VIDATTGTTKREVAQYYAQVADWLLPQLKDRPVALVRAPDGLGGELFFQKNPGQLHIPHV
LNYSKAQAGQAAMVLNRADSLLGAVQMNMLELHTWNATDKDFDRPDRFVLDLDPDPALPW
KAMLEATQLTLTLLDELGLKVFLKTSGGKGMHLVVPLTRRAGWDEVKDFSHALVEHMAGL
FPDRLSAVSGPKNRVGRIFIDYLRNGRGATTVAAYSLRAREGLPVSVPIWREELTQLKGA
NQWNIGNLLTRLAEVDDPWADMAGTRQSITVRMRKQLGID
NT seq 2463 nt NT seq  +upstreamnt  +downstreamnt
atggccaagcccctgcaggagtaccagcgcaagcgcgatttcaacgccacgcccgagccg
gccggcaagcgcgcccgcccccgctcggcccatgcgctgcagtactgcatccagaagcac
gatgccagccacctgcactacgacttccggctggaactcgacggcaccctcaagagctgg
gcgatccccaaggggccctcgctcgatcccaaggtccggcgcctggcggtgcatgtggag
gatcacccgctggattacgccaacttcgaagggcacatccccgaaggccattacggcgcc
ggcgatgtcatcgtctgggaccggggtgtctgggaacccgaaggcgacccgcgcgaagcc
tatgccaagggcaaactgcgctttcgcctgcagggcgagaaactatcgggggtctggaac
ctgttccgcacccacctggccggcaagaaagagcaatggatgctggtcaagtcccatgac
ggacaagcacgcagtgaaactgactacagcgtcgtcgaggccctgccggacagcgtgctg
agcgagcgtaccctgccgccacggcgcccggccaaggcacccgccgccacgcgcaaggcc
ggccgcaagcccctgccggagctgctgcagccgcaactggccacgttggtcgactccccg
cccagcggcgactggcgctacgaagtcaagttcgatggctaccgggtcctggcgcgcatc
gacggtgacgacgtgcgcctgttcacccgcaatggccacgactggagcgcgaagatgccc
cgtcaggtcaaggcgctcagggcactggggctcgatgcggcatggctggacggcgaaatg
gtggtagtcggcgataacggtgtggccgacttccaggccttgcagaacgccttcgacacc
gagcacgacgaacgcatcacctattacctgttcgacttgccctggctgggagacgaggac
ttgcgcgagctgccgctacaggcacgtcgcgccaccctggccaagttgctggaagacaac
gcttcgccgctgctgagctattccgccgacttcacggagccggtcgactcgctgctcgaa
agcgcctgccggctggaactcgaggggctgatcggcaaacgcgccgacagcccctatatc
ggccggcgcagtagcgactggatcaagctcaagtgcaagcagcgccaggaattcgtgatc
gtcggttacaccgaccccaagggcagccgtcatggtttcggcgccctgctgctggccctg
cacgatcacgacagcggccagctgcgctacgccggcaaggtcggcaccggcttcagcgcc
accacgctggacagcatcctcgcccgcctgaagccgctgcaggccgccaagcctcccttg
gtaagcccccctaccggggctgatgtccgcggcgtgcactggctcaagccgcacctgctg
gcggaagtcgcctatgcccagatgacccgcgaaggcatcgtgcgccactcggtgttccac
ggcctgcgcgacgacaaacccgccaccgacatcgatctggagcaagcgatgcccgccaag
cgcgcagcacaggcacgccccgagggcctgccccccctgcgcctgacccaccccgaccgc
gtgatcgacgcaaccaccggcaccaccaagcgcgaggtcgcacagtactacgcccaggtt
gccgactggctgctgccacagctcaaggatcggcctgtagccctggtccgggcgccggat
ggcctgggcggcgaactgttcttccagaaaaaccccggccagctgcatatcccccacgta
ctcaactacagcaaggctcaggcaggccaggcagccatggtgctcaaccgcgccgacagc
ctgctgggcgcggtgcagatgaacatgctcgaactgcacacttggaatgccaccgacaag
gactttgacaggcccgaccgtttcgtcctcgacctcgaccctgatccggcgctgccgtgg
aaagccatgctcgaggccacccagctgaccctcacgctgctagacgagctgggcctgaag
gtgtttctcaagaccagcggcggcaagggcatgcacctcgtcgtgccgttgacccggcgc
gccggctgggacgaggtgaaggacttcagccatgccttggtcgagcacatggccgggctg
ttccccgatcgcctcagtgccgtgtccgggccgaagaaccgggtcgggcggatcttcatc
gactacctgcgcaacggtaggggtgccaccaccgtcgctgcctactcgctgcgcgcccgc
gagggcctgccggtgtcggtgccgatctggcgcgaggaactgacccagctcaaaggcgcc
aaccaatggaacattggcaatctactgacgcggcttgccgaggtggatgatccgtgggct
gacatggccggaacccgccaatcgatcaccgtgcgcatgcgcaagcagctggggattgac
tga

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