Pedobacter sp. PACM 27299: AQ505_06380
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Entry
AQ505_06380 CDS
T04140
Name
(GenBank) LysR family transcriptional regulator
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pep03000
]
AQ505_06380
Transcription factors [BR:
pep03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AQ505_06380
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
MarR_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ALL05152
UniProt:
A0A0P0ND72
LinkDB
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Position
complement(1492285..1493157)
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AA seq
290 aa
AA seq
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MEFRQLSYFIKAAELLHFTAAAEQCFVTQSTLSQQVKQLEEELGMLLFDRVGKHVQLTEA
GKLFLNHARQIMLEIKKSKQAIFELNNLVNGELRIGVTYAFISLLLPSLTPFSNKYPGIK
LHIESGIAGELEARLKTADLDFILAFHEQSDNEGLEMQLLFSSRIKMVTSKKHPLAGLNK
ISLKELAQTEMILANKGFSSRDMLDEIFKKNNIIPNIKIEMNDTHSLLSLVDTGNWVTII
NEKTITGWDDLVAIPITGKELYKEAYILWQKGVFRKKSATLFIEELLKIV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaattcagacaacttagttatttcatcaaggcggcagaattgctgcatttcactgca
gccgcggagcaatgttttgtgacccaatccaccctatcacagcaggtaaaacaactggaa
gaagagctgggtatgctattattcgaccgggtgggcaagcatgtacagctcactgaagca
ggaaagttatttctaaaccacgccaggcagatcatgctggagatcaagaaatccaagcaa
gcgatttttgaattgaacaacctagtgaatggagagctgagaattggcgtgacgtatgcc
ttcatttctttgcttctcccctctcttacccctttctccaataaatatcccggcattaaa
ctacatatcgaatccggcattgccggagaattggaagcccggctaaaaaccgcagatctt
gattttatcctcgcctttcatgagcaatctgataatgaaggattggaaatgcaattgcta
ttttcttccaggataaaaatggtgacctccaaaaagcatcccttagcgggattaaacaag
atctctttaaaagaattggctcaaacggaaatgatcttagccaacaaaggattcagctcc
agagacatgctggacgaaattttcaaaaaaaacaacatcattccgaacattaaaatagag
atgaatgatacacattcactactttctttagtggataccggaaactgggtcaccattatc
aatgaaaagaccattactggctgggacgatctggttgccataccgattactggaaaagag
ctgtataaagaagcttatattttatggcagaagggggtttttagaaaaaaatcagcaact
ctttttatagaagagctgctgaagatagtataa
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