KEGG   Phalaenopsis equestris: 110032291Help
Entry
110032291         CDS       T05601                                 

Definition
(RefSeq) DNA ligase 6
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
peq  Phalaenopsis equestris
Pathway
peq03030  DNA replication
peq03410  Base excision repair
peq03420  Nucleotide excision repair
peq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110032291
   03410 Base excision repair
    110032291
   03420 Nucleotide excision repair
    110032291
   03430 Mismatch repair
    110032291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peq03032]
    110032291
   03400 DNA repair and recombination proteins [BR:peq03400]
    110032291
Enzymes [BR:peq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     110032291
    6.5.1.6  DNA ligase (ATP or NAD+)
     110032291
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     110032291
DNA replication proteins [BR:peq03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    110032291
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     110032291
DNA repair and recombination proteins [BR:peq03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     110032291
   NER (nucleotide excision repair)
    Other NER factors
     110032291
   MMR (mismatch excision repair)
    Other MMR factors
     110032291
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DRMBL Lactamase_B_2 RMMBL mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 110032291
NCBI-ProteinID: XP_020591527
LinkDB All DBs
Position
Unknown
AA seq 1354 aa AA seqDB search
MDTENLTLTTSSLFLSSVATFAAESPQVHPPKSFELLSHCSPLPTLPSSLPTFKLIPNSR
FIVDGFRTAGDFSISYFLSHFHSDHYTGLSPTWCRGIIFCSETTASLLVEILKVPHLFVY
SLPLNKTVTIDGSTVTLVDANHCPGAVQFLFEVGPERYVHTGDFRFCKSMKLDPFLLKFV
GADAVFLDTTYCNPKFVFQSQEESIEYVVKTIQRTKEENRGLVKSVLFLIATYVVGKERI
LLEIAQRCNCLVHVDGRKMGILSVLGLSDIGVFTEDASATDVHVIGWNLLGEVWPYFRPN
FVKMKEIIVERGYSKAVGFVSTGWMYEAKRDGFALRVKESLTIHLVPYSEHSSYDELREY
VRFLRPKRVIPTVGFDAEKLDGKHSVSVQKYFRGLVDETANKHDFLIPLHQKAVKADGRS
GNFISSNTNEPDEPVDTEKREDLALIMARSGEQNCIFGEASLMKEEDMKARIEELRHCLP
SWVNEDQILNLIRCADGDVVKAVSDFFERETEYYNRSNVSSPPSHSQIRSNNQIIPTPDL
KISEGAIDFVTNNSSQDNNMAINKRDIGSSSGTKRKASSTSSRLKKKGKIFWTIDSFGPK
QSTITKFFGKTTPTPIVDNTEPYKCELDLFLQVINYCMERNAAATLMNKVKGNVDLAVDI
YYRTSDGHAISDAAELKILSSEKSDFFGMSLGEISKDDDNLINVLLPIEKYSPIEHACWK
AEEPAPYLHLARTFELAEQEKGKIKTSAMFCNMFRSLLSLSPADVLPAVYLCTNRIAPDH
ENMELNIGGGLVISALEEACGTSKSRIKEMYNSSGDLGDVAQECRQTQKLLALPRPLSIC
TLFLMLRKISVETGSGSAARRKQIVVKLMRSCREMEMKFLVRTLVRNLRIGAMMKTILPA
LAQAVVLNCHSPMQPIGSCESLKPQLQGISAAVTEAYNISPNLDLLVPSLLGKGIEFSAS
ALTMEPGAPIPPMLARITNGVSQVLKLFQNRAFTCEFKYDGQRAQIHKLFDGSICIFSRK
MKESTSRFPDLLPIIKEYCNSAHATFILDAEIVAVDRKNGSKLMSFQELSSRERGSKDYS
VAMDKTKVDICVFIFDIMFLNGERLLASSLRRRREYIKDLIQKERPGYLELAKQLTVEAD
EACVSNETTLEKLNSFFEDACHSCEGIMVKSLDVDAGYFASKRAETWLKVKRDYVEGLGD
SLDLVPIGAWHGNGRKASWYSPFLMACYNPDSEEFQSVCRVMSGFSDSFYVNMKEFFSGE
RLLSKKPSYYQTDESPDLWFSPELVWEIRGADLTISPVHHAAIGLVHQSRGISVRLPRFV
RSLSDRKPEDCSTASDIAFMFQSQTRKMEIVNEE
NT seq 4065 nt NT seq  +upstreamnt  +downstreamnt
atggatactgaaaacctaaccctgacgacctcttccctcttcctctcctccgtcgccacc
ttcgcagctgaatcgcctcaagtgcatcctcctaagtccttcgaattgctctcccattgc
tcccctcttcccaccctcccctcttctctaccgacctttaagcttattccaaactcccgc
ttcatcgtcgatggcttccgcactgccggagatttttcaatctcttactttctctcccat
ttccattctgaccattatacagggctgagccctacctggtgccgtggcatcatattctgc
tctgagacaaccgcttcgcttctcgtggaaatcctcaaagttcctcatctctttgtctat
tccctaccccttaacaagactgtcacgatagatggaagtactgtcactttagtggacgca
aatcactgtcctggtgcagtccaattcctgtttgaagttggacctgaaaggtatgttcac
accggtgacttcagattctgcaagtccatgaaacttgacccattcttactgaaatttgtt
ggcgccgatgctgtgttcttggatactacttactgcaatcccaaatttgtgtttcagtcg
caagaggaatcgattgagtatgttgtaaaaactatccagagaacgaaggaagaaaatcga
ggattagtcaaatcagtattgtttcttattgctacctatgttgttggaaaagaaaggatt
ttgcttgagattgctcaaagatgcaattgcttggtgcatgtggatggcaggaagatgggg
attttatcagttttagggttgagtgatattggtgttttcactgaggatgcttcggctact
gatgttcatgtgattggttggaatttgttaggcgaggtttggccttatttccgaccaaat
tttgtgaagatgaaggagattatagtggagagaggttattccaaggctgtaggttttgtt
tcaactggttggatgtatgaggcgaagagggatggatttgccttgagggtcaaggaatct
ctcacgattcatcttgttccatacagtgaacactcaagctatgacgagcttagagagtat
gtgaggtttttgaggcctaaacgtgttatcccaactgttggttttgatgcagagaagttg
gacgggaagcattcagtgtctgtgcagaaatattttaggggtttggttgatgaaacagct
aataagcatgattttttgattcctttgcaccagaaggctgtgaaagctgatggaaggagt
ggaaattttatctctagtaacacgaatgaacctgatgaacctgtggatactgaaaaaaga
gaagatttagctctgataatggctcgatctggggaacaaaattgcatttttggggaagca
agcttaatgaaggaagaggacatgaaagctaggatagaggagcttcgtcattgcttgcca
tcttgggtgaacgaggaccagattttgaacttgattagatgtgctgatggagatgttgtt
aaagcagtttctgatttttttgaacgtgaaactgagtactataatcgctcaaatgtttca
tcgccgcctagtcattctcaaataagatcaaataatcagattataccgactccggatttg
aaaatttctgaaggagccatagattttgttactaacaattcaagtcaagataacaacatg
gccattaataagagggatataggaagctctagtggaacgaagagaaaggcttctagcact
agtagtaggttaaaaaagaaagggaagattttttggactattgattcattcgggccaaaa
caatcaacaataacaaagttctttggtaaaactacaccaacaccgatagttgataacact
gaaccatataagtgcgagttagatctgtttcttcaggtgataaactattgcatggagagg
aatgctgcagctactttaatgaataaagtaaagggaaacgtagatttagcagtggatatc
tattacagaacttctgatggtcatgccattagcgacgctgcggaattgaagattctttcc
tctgaaaaatcagatttttttgggatgtcactaggagaaatttcaaaggatgatgataat
ttgataaatgttttgctgccaattgaaaagtattcacccattgaacatgcttgctggaag
gctgaggagcccgcaccatatctccacttggctcgtacttttgaactggctgaacaagag
aaaggaaagataaaaacttctgctatgttttgtaacatgttcagaagtttgctttctttg
tcacctgctgatgtacttcctgcagtatatctatgcacaaacaggattgctcctgatcat
gaaaacatggaattgaatattggcggtggtctggttatttctgcattggaagaggcgtgt
ggaaccagcaaatccagaattaaagaaatgtacaactcttctggtgatcttggtgatgtt
gcgcaagaatgccggcaaacccaaaagttacttgctctgcctcgtcctctttcaatatgt
accttgtttctaatgctaaggaagataagtgtggaaacaggtagcggcagtgctgctaga
aggaaacaaattgtcgtgaaattgatgaggtcttgcagagaaatggagatgaagtttctt
gtccgaactcttgttcgtaatttgcgcataggagccatgatgaaaaccatcttaccagca
ttagcgcaggctgtggttttgaactgccactcacctatgcaacctattggatcctgtgaa
agcctaaaaccgcaacttcaaggaatttctgcagctgttactgaagcctataatatatct
ccaaatctggatttgcttgttccttctctcttgggcaaaggaattgagttttctgcttct
gctttgacaatggaaccaggcgcacctattccgcctatgcttgctagaatcaccaatggt
gttagtcaagtactgaagttgttccagaatagagcttttacatgtgaattcaaatatgat
ggccaacgagcccaaattcacaaactttttgatggctccatatgtatattttctcgcaaa
atgaaagaatcaacttctagatttccagatttgttaccaataataaaagaatattgtaat
tctgcccatgcaactttcatactggatgcggagattgttgccgttgatcgaaagaatgga
agtaagctcatgtcttttcaagagttatcatcacgagaacggggtagcaaagattattca
gttgccatggataagacaaaggtagacatctgtgttttcatttttgacataatgttttta
aatggagagcggttattggcctcatctttacgtcgaaggagggaatatataaaggatttg
attcaaaaggagaggcctggttacctggaacttgcaaagcaattaactgtggaagcagat
gaagcttgtgtgagtaatgagacaacattggaaaaactgaactcattttttgaggatgca
tgtcattcatgcgagggaataatggtaaaatcactggatgttgatgctggatattttgca
tcaaagcgtgccgagacgtggttaaaggttaagcgtgattatgtggagggattgggcgat
agtcttgatttagttccaattggtgcttggcatgggaatggaagaaaggcgagctggtac
agtcctttccttatggcatgctacaacccagattctgaagaattccagagtgtgtgcaga
gtcatgtctggtttctcagattctttctatgtcaatatgaaggaattcttctccggtgag
cgactgctatccaaaaaaccttcttactaccaaactgatgaatcacctgatttatggttc
tcaccagaacttgtttgggaaattcgcggggcagatttgacgatctcacccgttcatcac
gctgcgatcggattagtgcaccaatctcgagggatctcagtaagacttcccaggtttgtt
cgttcactatctgataggaagccagaagattgcagcactgcttctgatattgccttcatg
ttccaatctcagacaagaaaaatggagattgttaatgaagaatag

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