Candidatus Sodalis pierantonius: SOPEG_4020
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Entry
SOPEG_4020 CDS
T03006
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pes
Candidatus Sodalis pierantonius
Pathway
pes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SOPEG_4020 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pes03400
]
SOPEG_4020 (xseB)
Enzymes [BR:
pes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SOPEG_4020 (xseB)
DNA repair and recombination proteins [BR:
pes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SOPEG_4020 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
DUF6687
TMCO5
Motif
Other DBs
NCBI-ProteinID:
AHF75061
UniProt:
W0HMF1
LinkDB
All DBs
Position
4363951..4364199
Genome browser
AA seq
82 aa
AA seq
DB search
MPKKTEQPVSFETALKELEQIVTRLESGKLPLEQALNEFEQGVQLARQGQKTLQQAEQRV
QILLNDTPDAQLIPFAPENDAL
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaaaactgaacaacccgtcagttttgaaactgccctaaaagagctggagcag
atagtcacccgcctcgaatccgggaaattgccgctggagcaggcgcttaacgaattcgag
cagggcgtgcagctggcgcgccaaggtcagaaaacgctgcaacaggcggaacagcgggtg
caaatcttgttaaatgacacgccagacgcacagcttattccctttgcgccggaaaatgat
gcgctatga
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